Gene Swit_4460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4460 
Symbol 
ID5200130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4908387 
End bp4909661 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content55% 
IMG OID640584012 
Producthypothetical protein 
Protein accessionYP_001264936 
Protein GI148557354 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTATTT CTAGTGGCTC AAAGAGCAAG AGCGGACCGG CGAAATACAC GGAGCCGTAT 
ATTCGGCAAG GGCTTTACGA TGTTCAGAGT GCCTACAATC AGCAGCAGCC GCGACTTAAT
GCGCTGGGCG ACGTTGCTTC CGATGCTTTC ATGCGTAACG CGGGGGCCGC ATATTCGACA
AACCCATATG TTTCGAATGC TCAAGCCGCC GCTCGTACGA TCTCGAATGG CTATTTCCTT
GATCAGAACT CCGGTCAGGC AACTTACAAC CGTTTGCAGG GTGTGCAGAG CGATCCGTCT
TTGGGAGTGT TCCAAAACAT CGCCAACGGC GCTGGCAATA ACCCGGCTAC GCATTATGCA
TCGAACGTTG CCGGCGGCGG CTTTCTCAAT AATCAGCCAT CCGCCAGCCT TTATTCGACG
GTCATGGGTG ACGATTACCT GAAAGGTAAT CCTTATCTCG ATAGTATCGT TGCCCAGACC
AACGCAGACG TATCGAAGCA GGCGAACCGG ATGTTTGGCG CGCGCGGCAT GGGGACGGGT
ATTGGATCAG CCTTTGCTGA TGTATTATCA AAGAATCTTG CAAATAACGA GAGTCAGCTT
CGCTATCAGA ACTTCAATGA CAGTGCGAAT CGCCAACTTC AAGCGGCAGG ACAGTCAGAT
AATATATGGA ATAGCGAACG TGCACGGATG GATGCAGCGA CCGGTCTGCT GTCCTCAGAC
TACAATGCTG ATCAGGGGCG TCGTCTGGCC GCAGCGCAGG CGCTCGGCAA TCAGTTTGGA
CAGCAGCAGG ATCGTACTCT AGAGGCCGCC AAGGCTGGCG ATGCGGCACG TTCGGAGCAG
ATTGCGCAGA TGCTCCAGGC GCTCAGTCTA ACCGACCAAC TCAGCAACGC TCAATATGCT
GGATATGGTC CAACCACGGA TTTGCTGAAG GCCGGCGCAG CGATTCCGCT TATGGGTATG
GATAGTTATC AGCAGGCTCT TGCCAACCTT ACGAATGCGA CCAACAGCAG TACGTCCAAG
GGGCCGGGTA TTGCTTATAA CGTATGGAGT AATGCGGCTT CGTCGCTCTC GGATCGGCGA
ACGAAAACAA ACATCGAGAA AGTAGGCGAA CTAGACGATG GCCTGGGCAT CTATGATTTC
GACTATGTCG ACCTCGACCA TGGCGCGGGC CGGCAGCGCG GCGTGATGGC TGATGAAGTC
GCGATTCTGC GGCCTTGGGC GCTTGGTCCG CGCACCGCTG ACGGGTTCGC GACCGTCGAT
TATAAAAAGC TATGA
 
Protein sequence
MGISSGSKSK SGPAKYTEPY IRQGLYDVQS AYNQQQPRLN ALGDVASDAF MRNAGAAYST 
NPYVSNAQAA ARTISNGYFL DQNSGQATYN RLQGVQSDPS LGVFQNIANG AGNNPATHYA
SNVAGGGFLN NQPSASLYST VMGDDYLKGN PYLDSIVAQT NADVSKQANR MFGARGMGTG
IGSAFADVLS KNLANNESQL RYQNFNDSAN RQLQAAGQSD NIWNSERARM DAATGLLSSD
YNADQGRRLA AAQALGNQFG QQQDRTLEAA KAGDAARSEQ IAQMLQALSL TDQLSNAQYA
GYGPTTDLLK AGAAIPLMGM DSYQQALANL TNATNSSTSK GPGIAYNVWS NAASSLSDRR
TKTNIEKVGE LDDGLGIYDF DYVDLDHGAG RQRGVMADEV AILRPWALGP RTADGFATVD
YKKL