Gene Swit_4447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4447 
Symbol 
ID5199993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4896488 
End bp4897537 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content59% 
IMG OID640583999 
Producthypothetical protein 
Protein accessionYP_001264923 
Protein GI148557341 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.159299 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGGAC CCAAACCCCT GCCGAAGATG CTGTTCGAAG AGGACTATGC GCGGCGGCTG 
GAGCAGGAGC GCGACGCTGC CGCTTTTGCG GAAGGGCGGG ATGTGCCGGA GATCGTGGTG
AACGGGCGCA GACCGTCAGG CGAGCCGGTG AAGAGCGGAA AGGGCTTCCT GGAGCGGATC
GACGACTTGT TCGATACCAA TTTGAGCGGG ATGAATCCTC ATCGCACGTC CGCGGCGAGG
CAAGGCCCTT CCGATCAGGG GCCGGTCGAC TGGAAGATGG CCCACTATGA TCTGGGGCCT
GCGCCGGGCC TGGCGGAAAC CTATTCCTAT GGCGGCAGGA GCTATCCCTC GTTCGAGGCG
GCACAGGCCG CTCATCCGGA CATGCCGCTG ATCGGCAATC CGCCGGGCGC GGCGAGCGAA
TATGCGGCGC GGCGGGACAA GGCGTTTCTC GACAGCATCG GATCGGGCGC GCTGGGCCTT
GGTCCGATGT CCTATGTGAT GGGCGGTTCG CCTGAAACCA TCCAGGCGAG TACGCAGTTC
GACGAGGCGT TGGGTGGGTT GATGGCCGGA ACTGCGATGC GCCCCTCGAT ACGACAGCGG
TTCGAATCCT TCGTGGATAA GAGGCCAGTG GAAAGCTTCT TGCGCTATCG GTGGCCGCCA
CTTGCCAACC GGCTTTCCAG CAGCCGCGGA GATCTACCTG TCGGGCGAGG GGAATATGGG
GTGCAGGACA TCGCTACAGC TTCCAGAGAG CTGGGCCATG AAGTCGGCTA TTTCAGAAAT
CGCGCAACAC AGCAGCGCTA TTTGCGCGAT CTAGGGCCAC AAATGGGTGA GGTGCCTTTC
AATTCGCGCT TGATCCTTCA CACACATCCG GGAGAGACTC ATATTTCCGT AAAACCTAGC
GATTCTGACA GAATTGCCCT TGATAATTTG GGGCAAAGAT CTTCGGTGAT AGTGAACGAG
AGGGGTGACA AGGCCATTCG ATATCACCGG AATCCACGAG ACGATGGGCG TATCGGAGAA
TATCGCTATG GTACTTGGCG TTTTAAATAA
 
Protein sequence
MSGPKPLPKM LFEEDYARRL EQERDAAAFA EGRDVPEIVV NGRRPSGEPV KSGKGFLERI 
DDLFDTNLSG MNPHRTSAAR QGPSDQGPVD WKMAHYDLGP APGLAETYSY GGRSYPSFEA
AQAAHPDMPL IGNPPGAASE YAARRDKAFL DSIGSGALGL GPMSYVMGGS PETIQASTQF
DEALGGLMAG TAMRPSIRQR FESFVDKRPV ESFLRYRWPP LANRLSSSRG DLPVGRGEYG
VQDIATASRE LGHEVGYFRN RATQQRYLRD LGPQMGEVPF NSRLILHTHP GETHISVKPS
DSDRIALDNL GQRSSVIVNE RGDKAIRYHR NPRDDGRIGE YRYGTWRFK