Gene Swit_4437 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4437 
Symbol 
ID5197312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4886095 
End bp4886817 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content55% 
IMG OID640583989 
Producthypothetical protein 
Protein accessionYP_001264913 
Protein GI148557331 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0922209 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGGT TTTTCTCGCC GGAGGACCTC GAACGCTGGG GAATGGCGGA GGGCGATCGA 
AACTCCGTTT CGTCACTGAA GTGGCTGGTT CGGGAATCGG GATCGTCGAA AGCCGACCAG
CAGGCCATTG CGCAATGGGA GGCGGAGTTT CGAAAGCAGC GCGGCCTGGG GCCCGATGAT
CCGGTGCCGG TTACGCTCCC CAGGATGGTG TTGGAGGCGG ATCATGCCAG GAAGCTGGAG
GCTCAGCGGG AAACAGAGCG GGGGTTTTTG CCACGAGGAA CGCAAACGCC CCAACAGAAG
GGCACATCAA AAATCGGAAT GGTTGCGATA GTTCTGCCAA TTCCCGGTTG GACGCAGGAT
CAAATAGACA AGGCATTAGA CAAGACCGTT GAACGTAATA ATTTTCGGAA GAAGGATTTT
TTCAGTATTC CAGCCATCGA GAATCGCGTT GAACTGTTTT CGAGAAGTCG TCCCGGGGCA
CGAAACGACG TCAAGGCGAA AATTAAGGGA GCAGAAGCCT CGGGTAATTT CCTTTTTGGT
GCGGAGGCTG CCGCTGCTGG CCTTACTGAA ACCGAAGCGT TGCTTTGGGC GAGGGGCGCC
CAGATATATC AAGATGTAAA AGCCAAGAAA TGGCCAAGCG GACGTGACAA TCCGGGCGAT
GCCGATCGCA TACGGGATGG ATATCGCTAT TTTCATCAGC GCTATCGGGC TTCCGACAGA
TGA
 
Protein sequence
MTRFFSPEDL ERWGMAEGDR NSVSSLKWLV RESGSSKADQ QAIAQWEAEF RKQRGLGPDD 
PVPVTLPRMV LEADHARKLE AQRETERGFL PRGTQTPQQK GTSKIGMVAI VLPIPGWTQD
QIDKALDKTV ERNNFRKKDF FSIPAIENRV ELFSRSRPGA RNDVKAKIKG AEASGNFLFG
AEAAAAGLTE TEALLWARGA QIYQDVKAKK WPSGRDNPGD ADRIRDGYRY FHQRYRASDR