| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4430 |
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| Symbol | |
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| ID | 5198393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4877619 |
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| End bp | 4879334 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640583982 |
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| Product | GAF sensor hybrid histidine kinase |
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| Protein accession | YP_001264906 |
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| Protein GI | 148557324 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGTCGT CCGGGGTCGA TGACGATGGC GGTGCAGGCG ATCGTCTCGC CGGGCGCTGG
TTCCTCCTTG CCTCGGCGAT CGAACGGCTC GGCAACGCGC GAACCCTGGA GGGGATCACC
GACATCCTTC GCGGATCGGC GCGCGGCATT GCCGGCGCCG ACGGCATAGC CATCGTCCTG
CGCGACGGCG ACCTGTGCCA TTATGTCGCG GAGGACGCGA TGGCGCCGCT CTGGGCCGGC
CAGCGTTTTC CGGCCGAAAC CTGCATTTCC GGCATCGCCA TGCGCGACCG GCAACCGATC
GTCATTCCAG ACGTGATGGC CGATCCGCGC GTCCCGCACG CCGCCTATGC GGCGACCTTC
GTGCGCAGCA TGGCGATGAT CCCGATCGGC ATGCCCGATC CCGTCGCCGC GATGGGCGCC
TATTGGGCCG AGGCCCGCGA CCCCGACGAG ACAGCGGTGA CCCTGCTCCG CACGCTCGGC
CGGGCCGCGA CGACCGCGCT GGAAAACGCC CGCCTCCTCG ATGCGCTCGG CGCGCTGAAC
CGCGTGCTCG ACGCGCGGGT CGCCGATCGC ACCGCCGAGC TGGAACAGGC GCGCGACATG
ATCCGCCAGT CGCAGAAGAT GGAGACGATC GGTCAGCTCA CCGGCAACGT CGCCCATGAT
TTCAACAATC TGCTGACGCC GATCGTCGGC AGCCTCGATC TCATTCTTTC AGGCATGCCG
CTCGACGAAC GCGTATTGCG CACGGTCAAG GTGGCGATGG ACGCCGCCGA TCGCGCGCGC
CTGCTGGTCG ATCGCCTGCT CGCCTTTGCC CGCCGCCAGC CGCTCGCGCC CAGCCCGGTC
GACCTGCGCG GCCTGATCGA GAGCATGCGT GATCTGCTCG TCACCTCGCT CGGGGTCCGG
ATAGCCCTGG CGATCGACGT CGAGGCGGAC CTGCCCGCCG TCCGTGGCGA TCGCCACCAG
CTCGAAATGG CGCTCCTCAA CCTCACGGTG AACGCGCGCG ACGCGATGCC GGATGGCGGC
ATCCTGTCGA TATCGGCGCG CCGCGCGCCG GCCGCGGGCC TCCCGTCGAA CCTCGCCAAG
GGCGACTATG TGCGCATCAC AGTCACCGAC AATGGCCGGG GCATGGACGA AGCCGTCCGT
ACCCGGGCGA CCGAGCCCTT CTTCAGCACC AAGGACGCCG GCCACGGCAC CGGCCTCGGC
CTGTCGATGG CGCACGGCCT GGCCGGCCAG CTCGGCGGTA CTTTGCGGAT CGACAGCACG
CCCGGCCTCG GCACCACGGT CGGCGTCTGG CTCCCCGTGG CGCCGGAAGC AGCAAGGGCG
GCCCCGGTCG GCGATGCCCC GTCGATCACC GACGAAAAGG GCGGCCTGAT CCTGGTCATC
GACGACGAAC CGCGCGTCCG CTCGGCCACG GCCGAGATGC TCGGCTCGCT CGGCTATGAC
GTGGTCCAGG CGTCGGACGC GCGCGAAGGG CTCGACCTGC TCGACCACGG CCTCGATCCG
GTCGTCGTCA TCACCGACCA TGTCATGCCG GGCATGACGG GCGCGGAGCT GGCGCTGCAC
CTCCGCGCCA CCCGGCCGAC GCTCGCCGTG CTGATCATGT CGGGCTATCA GGGGGTCGAT
CTCCTCGCCC CCGACATCCC CCGGCTCGCC AAGCCCTTCC GCCACAAATA TCTCAGCGCC
GGGATCGCCG CGGCGCGGGA GCTGGCGGCG GCCTGA
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| Protein sequence | MRSSGVDDDG GAGDRLAGRW FLLASAIERL GNARTLEGIT DILRGSARGI AGADGIAIVL
RDGDLCHYVA EDAMAPLWAG QRFPAETCIS GIAMRDRQPI VIPDVMADPR VPHAAYAATF
VRSMAMIPIG MPDPVAAMGA YWAEARDPDE TAVTLLRTLG RAATTALENA RLLDALGALN
RVLDARVADR TAELEQARDM IRQSQKMETI GQLTGNVAHD FNNLLTPIVG SLDLILSGMP
LDERVLRTVK VAMDAADRAR LLVDRLLAFA RRQPLAPSPV DLRGLIESMR DLLVTSLGVR
IALAIDVEAD LPAVRGDRHQ LEMALLNLTV NARDAMPDGG ILSISARRAP AAGLPSNLAK
GDYVRITVTD NGRGMDEAVR TRATEPFFST KDAGHGTGLG LSMAHGLAGQ LGGTLRIDST
PGLGTTVGVW LPVAPEAARA APVGDAPSIT DEKGGLILVI DDEPRVRSAT AEMLGSLGYD
VVQASDAREG LDLLDHGLDP VVVITDHVMP GMTGAELALH LRATRPTLAV LIMSGYQGVD
LLAPDIPRLA KPFRHKYLSA GIAAARELAA A
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