| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4386 |
|---|
| Symbol | |
|---|
| ID | 5198747 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 4838777 |
|---|
| End bp | 4839334 |
|---|
| Gene Length | 558 bp |
|---|
| Protein Length | 185 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640583938 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001264862 |
|---|
| Protein GI | 148557280 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2128] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.545671 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTATAT CGATACCGGA TGACAATCCT GATCCTTTCT CCAGCCTGGG AGATTATTTT
TCGCCGGAGA TGGTCAGGGC ATCCAATGGT TTTTCGCAAA CTGTCTACAA GAAAACAAAA
TTGCCGTTGC GCATATTCGA AGGCGCCAGG GCGCGTACGG CTGAAATCAA CGGATGCATG
GTTTGTCGAG CGTTTCGCGC CAAAAGGGAT TTGCAGGATT TCTATAAATC ATCGGGCGTT
GATTCATCCA ATACGGTAAT CGAAAATGGC GCCGCTCCAG ACGAAGAATT CTACCAGAAT
ATAACGAACT GGAAATCATA TCCGGCCTAT AGCGAACGTG AGAGGCTGGC CATCGAATAT
GCGGAACGCT TCTGCATCGA GCCGCAAGCC CTGGCGAAGG ACGATATCTT CTGGGAAAGG
ACCAAACGCG TATTCTCGGA TGAGGAAATC GTCGACCTCA GCCAATGCGT GGCGTCTTTC
ATCGCGACCG GCCGGGTCGC TCACGTCCTC GGCCTGGACA AGGTCTGTTC CATCATCGAA
CTGGGCGCCG CAGAATAG
|
|---|
| Protein sequence | MRISIPDDNP DPFSSLGDYF SPEMVRASNG FSQTVYKKTK LPLRIFEGAR ARTAEINGCM
VCRAFRAKRD LQDFYKSSGV DSSNTVIENG AAPDEEFYQN ITNWKSYPAY SERERLAIEY
AERFCIEPQA LAKDDIFWER TKRVFSDEEI VDLSQCVASF IATGRVAHVL GLDKVCSIIE
LGAAE
|
|---|
| |