| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4377 |
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| Symbol | hslU |
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| ID | 5198005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4830589 |
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| End bp | 4831890 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640583929 |
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| Product | ATP-dependent protease ATP-binding subunit HslU |
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| Protein accession | YP_001264853 |
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| Protein GI | 148557271 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
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| TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACA ATCTCACCCC CAAGGCGATC GTCGCCGCGC TCGACGCGCA TATCGTCGGC
CAGGCCGACG CGAAGAAGGC CGTCGCGGTC GCGCTGCGCA ACCGCTGGCG CCGGCAGCGG
CTGCCCGAAA CCCTCCGCGA CGAGGTGACG CCCAAGAACA TCCTGATGAT CGGGCCGACC
GGCTGCGGCA AGACCGAGAT CAGTCGCCGG CTCGCCAAGC TGGCCGATGC GCCCTTCGTC
AAGGTCGAGG CGACCAAGTT CACCGAGGTC GGCTATGTCG GCCGCGACGT CGAGCAGATC
GCCCGCGACC TGGTCGAGGA GGCGGTGCGG CTGGAGAAGG AGCGTCGCCG CGCGGCGGTG
AAGGACAAGG CCGAGGAGGC GGCGATGGCG CGCCTGCTGG ACGCGCTGGT CGGCAAGGAT
GCGAGCGAGG CGACCCGGAT GGCGTTCCGC CAGCGCTTCG AGGATCACCA GCTCGACGAC
AAGGAGATCG AGATCGAGGT CGAGGATAGC GGCGGCATGC CGCTGGAGAT CCCCGGCATG
GGCGGACAGG TCGGCATGAT CAACCTGGGC GACATGATGG GCAAGGCGTT CGGCCAGGGC
CGCACCAAGC GCCGCAAGAT GACGGTCCGC GCCGCCTGGT CCAAGCTGGT CGACGAGGAG
GCCGACAAGC GGCTCGACCA GGACGAGGTG AGCCGGGTGG CGTTGCAGGA CGCCGAGCAG
AACGGCATCG TCTTCCTCGA CGAGATCGAC AAGATCGCGG TCAGCGACGT GCGCGGCGGA
TCGGTGAGCC GCGAGGGCGT GCAGCGCGAC CTGCTGCCGC TGATCGAGGG AACGACGGTC
GCGACCAAAT ATGGGCCGCT CAAGACCGAC CATATCCTGT TCATCGCGTC GGGCGCCTTC
CATGTCGCCA AGCCGTCGGA CCTGCTGCCC GAACTGCAGG GGCGCCTGCC GATCCGGGTC
GAGCTCAAGG CGCTGACCGA GGCGGATTTC GTCCGCATCC TGTCCGACAC GCGGGCGAGC
CTGACCGAGC AGTATCGCGC GCTGATCGGC ACCGAGGGCG TCGAGATCGG CTTCACCGAC
GACGGCATCG CCGCGATCGC GAAGATCGCC GCCGAGGTGA ACGGCCAGAT CGAGAATATC
GGCGCGCGCC GGCTGTCGAC GGTGATGGAG AAGCTGCTCG AGGAGGTGAG CTTCGACGCC
GAGGACCGCA AGGGTACGGC GCTGACGATC GATGCGGCCT ATGTCGACGC GCAGCTTCGC
GAGGTGGCGC GGAACACCGA CCTGTCGAAA TATGTGCTGT AG
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| Protein sequence | MNDNLTPKAI VAALDAHIVG QADAKKAVAV ALRNRWRRQR LPETLRDEVT PKNILMIGPT
GCGKTEISRR LAKLADAPFV KVEATKFTEV GYVGRDVEQI ARDLVEEAVR LEKERRRAAV
KDKAEEAAMA RLLDALVGKD ASEATRMAFR QRFEDHQLDD KEIEIEVEDS GGMPLEIPGM
GGQVGMINLG DMMGKAFGQG RTKRRKMTVR AAWSKLVDEE ADKRLDQDEV SRVALQDAEQ
NGIVFLDEID KIAVSDVRGG SVSREGVQRD LLPLIEGTTV ATKYGPLKTD HILFIASGAF
HVAKPSDLLP ELQGRLPIRV ELKALTEADF VRILSDTRAS LTEQYRALIG TEGVEIGFTD
DGIAAIAKIA AEVNGQIENI GARRLSTVME KLLEEVSFDA EDRKGTALTI DAAYVDAQLR
EVARNTDLSK YVL
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