| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4242 |
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| Symbol | |
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| ID | 5196519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4674921 |
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| End bp | 4676570 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640583796 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_001264720 |
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| Protein GI | 148557138 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.252805 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCCTG ATCCGGTGCT GCCGAGCCGT ACAGATTATG TCATCGTCGG CGGGGGCACG
GCCGGCTGCA TCCTGGCGAG CCGGCTGTCG GAGGACCCGC GCGTCACCGT GCTGCTGATC
GAGGCGGGAG AGGACCATGC CCCCGGCGAG GAGCCCGAGG AGATTCGCGA CAGCTTCCCG
CGCGCGGCGA CCCCGGCGCA TCTCTGGCCC GGCCTCGTGG TGGAGCGGCG CGCGGGCCAG
CCGCCCCGGC CGTTCGAGCA GGCGCGGGTG ATCGGCGGCG GGTCGAGCGT GATGGGCATG
CTGGCGATGC GCGGCCTGCC CGACGACTAT GACCAATGGG CCGCAGAAGG CGCGCAGGGC
TGGGGCTGGG CCGAGGTGCT GCCCTATTTC CGGAAGCTCG AACGCGACGA GGATTGCGAT
GGGCCGCTGC ACGGGCGCGA CGGCCCCTTG TCCGTCCGCC GCCAGCCCCC CGAAAGCTGG
CCGCCCTTCT GCCGGGCGAT CTCGGACGCG GCGCAGGGGC GGGGCCTGCC GGTCGCGGAG
GACCTCAACG GACCGCCGGC GGACGGCGTC TATCCGGTGC CGATGAACAA TACGCCGCGC
CATCGCGTCT CCGCCGCCTC GGCCTATCTG ACCGCCGAGG TGCGGGCGCG CCGCAACCTG
GTCGTCGCCG CGCGGATCAG CGTGTCGTCG ATCCTGATCC GCGACGGACG CGCGACCGGC
GTCGAGCTGG TCCGCGACGG CGCCGCGCAG ATCGTCGAAG CCGGGGAGGT CATCCTGTCG
GCGGGGACGC TGCATTCGCC CGCGCTGCTG CTCCGTTCGG GGATTGGGCC GGGGTTGCGG
ATCGCGGCGG CCGGCGTCGG CGCCGGGTTG CAGAACCATC CGCTGCTGCC GCTGTCGGTC
GTGCTGCGGC GCCACGCGCT GCAATCCGAC GCGATCCGGC CGGCTTTCCA GAACTGCCTG
CGCTATTCGT CAGGGCATCC GGACACGCCC GGCGGCGACA TGTTCATGAC CGTGCTCAAC
AAGACCGGGC TGCATCCGCT GGGCCGGCGG ATCGGCGGGC TGATGCTGGC GGTCTACAAG
AGCTTCAGCC GGGGCGAGGT GACGCTCGAT CCGGCATCGG GCGCGCCGCG TGTCCGCTTC
AACCTGCTCG CCGACGAGCG AGACGAGGCG CGGCTTGCCG GCGCGGTCCG CTTCGCCGCC
GCGCTGCTGG CGGACCCGGC GGTCCGGCGC ACGGCGGACA CGGCCTTCTT CCCGGTGAAC
GGCCCGCTGA TCCAGCGCCT CGCGCGGCCC GATCCGGCGA GCCGCGTCGC CAACCGGATT
GCGGCCGCCG CGCTCGACGC GCCCGCCATG CTGCGCCGGA TCGCCGTGCG CCGCGCTGGT
CCGTCGCTCG ATCGGCTGCT CCGCGACGAG GAGGCCCTGC GTGCTTTCGT GCGCGATCAG
GCGGTGCCGA CGGGGCATGT CTGCGGCACC TGCCGGATGG GATCGGACGA TGCGTCGGTG
GTCGATCCGC GCCTGCGGGT CCGCGGGCTC GACGGCCTGC GCGTCGTCGA CGCGTCGGTG
ATGCCGTCGA TGGTGCGGGC CAACACCAAT ATTCCGGTTG CGATGATCGC GGAAAAGGCC
GCCGACATCA TCAAGGGGGA GCGGAGATGA
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| Protein sequence | MRPDPVLPSR TDYVIVGGGT AGCILASRLS EDPRVTVLLI EAGEDHAPGE EPEEIRDSFP
RAATPAHLWP GLVVERRAGQ PPRPFEQARV IGGGSSVMGM LAMRGLPDDY DQWAAEGAQG
WGWAEVLPYF RKLERDEDCD GPLHGRDGPL SVRRQPPESW PPFCRAISDA AQGRGLPVAE
DLNGPPADGV YPVPMNNTPR HRVSAASAYL TAEVRARRNL VVAARISVSS ILIRDGRATG
VELVRDGAAQ IVEAGEVILS AGTLHSPALL LRSGIGPGLR IAAAGVGAGL QNHPLLPLSV
VLRRHALQSD AIRPAFQNCL RYSSGHPDTP GGDMFMTVLN KTGLHPLGRR IGGLMLAVYK
SFSRGEVTLD PASGAPRVRF NLLADERDEA RLAGAVRFAA ALLADPAVRR TADTAFFPVN
GPLIQRLARP DPASRVANRI AAAALDAPAM LRRIAVRRAG PSLDRLLRDE EALRAFVRDQ
AVPTGHVCGT CRMGSDDASV VDPRLRVRGL DGLRVVDASV MPSMVRANTN IPVAMIAEKA
ADIIKGERR
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