| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4234 |
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| Symbol | |
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| ID | 5199421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4668244 |
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| End bp | 4669122 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640583788 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001264712 |
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| Protein GI | 148557130 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.0682688 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGATG GAGAAGGGCT GGCCGCGTTC GTCGCGATCG CCGAGCAGCG CAGCTTCTCC
CGCGCCGCCG ACACGCTCGG CATCGCCCAG TCGGTGGCGA GCAAGCGGCT GCGGCGGCTG
GAGGACCAGT TGGGCACCCA ACTCGTCGAC CGGACGGTGC GTACCGCGAT CCGCCTGACC
CGCGAGGGCG ACATCTTCCT GCCGCAGGCG ATCGAGGCGC TGGCCCGGCT CGACCGGGTC
GAGCGGATGG GCCGCAGCCT GGGGCGGGGG AGCAGCGGGC CGCTGCGGAT CGGCTTCGTC
TTCTCGGCGG CGATGAACGG CACGCTGGGC CGCATCCTGA CGGCGGTGCG GGCGGGGCTC
CCGGACATCG AGCTGGCGCC GCGCCTGATG GAGACCCCCG AGCAACTGGC CGCGCTCGAT
TCCTGCCGGC TCGACATCGG CCTGATGCGG CCGCGACCCT CCTATCCCGA GGATTGCCGG
GCGATCGACA TCCATTCCGA AGAGCTGATG GTCTGCCTGT CGACCGGCCA TGCGCTCGCC
GCAGCATCGG CGCTGCGGCC GGACCAGCTT GCCGGCCAAT GCTTCATCGT GCCGCAGTTC
CACGAGCAGG TCGGCCTGAT CGACAGCATC CGCCGCCTCG CGGACGCGGG CGGCTTCCCG
ATGCCGCGCA TCGTGCGGAC CGACGACTTC GTCACCGCGG CCTGCCTGGC CTCCGCCGGC
GAAGGCCTGG TCCTCGCGCC GGCCTCGCTC GCCAAGCTGA ACCTCGACGG CGTCCGCTTC
CTGGCGGTCG GCGGGTTCGC GGAAAGGCTC AGGATTGTCC TCGTCCACCG CACCGACGCG
CCGCGCGAGG CGCTGGCGAG GATATTGGGT TCGCTGTGA
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| Protein sequence | MIDGEGLAAF VAIAEQRSFS RAADTLGIAQ SVASKRLRRL EDQLGTQLVD RTVRTAIRLT
REGDIFLPQA IEALARLDRV ERMGRSLGRG SSGPLRIGFV FSAAMNGTLG RILTAVRAGL
PDIELAPRLM ETPEQLAALD SCRLDIGLMR PRPSYPEDCR AIDIHSEELM VCLSTGHALA
AASALRPDQL AGQCFIVPQF HEQVGLIDSI RRLADAGGFP MPRIVRTDDF VTAACLASAG
EGLVLAPASL AKLNLDGVRF LAVGGFAERL RIVLVHRTDA PREALARILG SL
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