| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4214 |
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| Symbol | |
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| ID | 5199633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4642649 |
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| End bp | 4644829 |
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| Gene Length | 2181 bp |
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| Protein Length | 726 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640583768 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001264692 |
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| Protein GI | 148557110 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.760297 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCACCA TGGCTTGCTC CTTGCAGCGT TCGGCCCGAA CCGGGCTGCT CCTCGCGCTG
ATCGCCTCGG CGAGCGGCGC CGCGCTGGCC CAGGCGACGC CCGCGGCCCC GGCCCCGGCC
CCGGCCGCCG CCGCCGATGA CGGCGGGATC GCCGAGATCG TCGTGACGGC GCAGCGCCGC
GCGCAGAACC TCCAGAACGT CCCGATCGCG GTGACGGCGC TCGCCGCGAA GACGCTCGAA
GCCGCCAACA TCCAGGGCAC CCCCGACCTC GTCATCCTGA CGCCGGGGCT CACCTTCAAC
AGCGTCGGCG GCTATGGCCA GCCGCGCATC CGCGGCATCG GCACCACCGC CGACACGCCG
ACCCTGGAGA ACCCGATCGC GACCTATGTC GACGGGGTCT ATTATGCCCA TCAGGGCGGC
AGCATCCTGT CGTTCAACAA TATCGAGCGG ATCGAGGTGC TCAAGGGACC GCAGGGCACC
CTGTTCGGCC GTAACGCGAC CGGCGGCCTG ATCCAGATCA TCACCCGCGA GCCGGGCCAG
GCCGTCGAGG GGGAGGCGAG CCTCTCCTAC GAGAATTACA AGACGCTGAC GGCCAACGCC
TATCTCGGCG GCGGATTGTC CGAGACGGTC GCCGCCGACC TCGCGCTCTA TGTCCGCCGC
CAGGGCGACG GCTATGGCGA CAATCTGGTC ACCGGGCAGG AGATCAACAA GACCGACAGC
TTCGCGGCGC GGTCGAAATG GGTGGCGACG CCCGGCGACC ACACCAAGCT GACCTTCATC
GCCGATTATG CGCGCAACAG CGGCGCCACC GCCCAGGGGC CCGCGCCGGG GACGACCCCG
CCGGGGGGAA CGCCGCTGCT CGACGGCCAG GACGTAGCGG TGCCCGCGCC CTACCGGAAC
AGGTTCACCC AGGGCGGCGC GAGCCTCAAG ATCGAGCATG AGTTCGACGT GCTCCACTTC
GTCAGCACCA CCGCCTATCG CAAGAGCCGG GGGACGATCT TCTTCCCGAA CGCGGTGACC
GATCCCGCCT TCCTGACGCT GGTCAAGCTC TACGACCGGG CGGAGCAGGC GAGCCAGGAA
TTCCAGCTCC AGTCGCCCGC CGGCGCCGGG CTCGACTGGA CCGCGGGCCT CTACCTCTTC
TACGCCGATG GCGGCTGGCG CCCGGCGGCG CTGTCGGGCG GCGGGCTCGC GCCGCTCACC
GGCATCGCCT TCGACAGCGG GCAGAAGACC TATTCGGGCG CGCTCTATGG CCAGTCGACG
ATCCACCTCG GCGAAGGCAC CGGCCTGACG CTCGGCCTGC GCTACACGAT CGACCGCCGC
AAATGGCATG CCGAGCAGAG CTTCGACGCG CCGTTCCCGC TGGGGCCGTT CGCGGACGAG
GGCAAGAAGA CCTTCCGCAA GCTGACCTGG CGGGTATCGC TCGACCACAA GTTCGACAGC
GGGGTGCTGG TCTACGCCTC GGCCAATCGC GGCTTCAAGT CGGGCGGCTT CAACGACCTC
GTCATCCCGG CGACGCCCTA TCTGCCCGAG ACGCTCGACG CCTATGAGGT CGGCCTGAAG
TCGACCCTGT TCGACCGCCG CCTGCGCTTC AACGCGGCGG GTTTCTACTA TGACTACAAG
AACCTGCAGG TGACCCGTTA TTCGAACGGC ATCCTGGTGC TCTACAACGG GGCGGGCGCC
GAGATATACG GCCTCGACCT CGACGCCGAA GCCTCGGTAT CGTCGCGGTT GCGGCTGGGC
CTCGGCCTGT CGCTGGTCCA TGGCCGCTAC ACGTCCTTCC CCAATGCCGA CATCACCACG
CCGGCGCCGG GCGGCGGCAC GATCATCGCG ACGGGCAGCG CGAAGGGCAA CCGCCTGTCC
TACACCCCGG ACTGGACGCT CAACCTGTCG GCCGACTATT CGGTGCCGTT GCCCAATGGA
TCGCTCGATC TCAACATGAC CTATTATCAT AGCGACGGGT TCGTCGGCTC GCCCGACGAA
CGGCTGCGCC AGGGCCGCTA CGATACCCTC AACGCGTCGT TCGGCTGGAC GTCGCGGGAC
AAGAACTGGG CGGTGACGGC GTTCGGCCGC AACCTCACCG ACAAGCGCTA CGCGGCGGCG
ATCTATGCCC AGGCCAATGG CGACGGCGTC CAATATGCGG CGCCCCGCAC CTATGGCCTG
CGCGTCCGGC GGAGCTTCTA G
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| Protein sequence | MITMACSLQR SARTGLLLAL IASASGAALA QATPAAPAPA PAAAADDGGI AEIVVTAQRR
AQNLQNVPIA VTALAAKTLE AANIQGTPDL VILTPGLTFN SVGGYGQPRI RGIGTTADTP
TLENPIATYV DGVYYAHQGG SILSFNNIER IEVLKGPQGT LFGRNATGGL IQIITREPGQ
AVEGEASLSY ENYKTLTANA YLGGGLSETV AADLALYVRR QGDGYGDNLV TGQEINKTDS
FAARSKWVAT PGDHTKLTFI ADYARNSGAT AQGPAPGTTP PGGTPLLDGQ DVAVPAPYRN
RFTQGGASLK IEHEFDVLHF VSTTAYRKSR GTIFFPNAVT DPAFLTLVKL YDRAEQASQE
FQLQSPAGAG LDWTAGLYLF YADGGWRPAA LSGGGLAPLT GIAFDSGQKT YSGALYGQST
IHLGEGTGLT LGLRYTIDRR KWHAEQSFDA PFPLGPFADE GKKTFRKLTW RVSLDHKFDS
GVLVYASANR GFKSGGFNDL VIPATPYLPE TLDAYEVGLK STLFDRRLRF NAAGFYYDYK
NLQVTRYSNG ILVLYNGAGA EIYGLDLDAE ASVSSRLRLG LGLSLVHGRY TSFPNADITT
PAPGGGTIIA TGSAKGNRLS YTPDWTLNLS ADYSVPLPNG SLDLNMTYYH SDGFVGSPDE
RLRQGRYDTL NASFGWTSRD KNWAVTAFGR NLTDKRYAAA IYAQANGDGV QYAAPRTYGL
RVRRSF
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