| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4149 |
|---|
| Symbol | |
|---|
| ID | 5197366 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 4562616 |
|---|
| End bp | 4563626 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640583703 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001264627 |
|---|
| Protein GI | 148557045 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.269133 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTTGT CTTCGAAGGA GCCGGTGCTC TTCGTCGGTT ATGGATCGGT CGGCAGCGAG
GCGGCGCGCA GCTTGCGCCG GCTCTATCCC GACCTTCCCT TCGTGATCGC CGGACGGCGG
CTGGAAAAGG CGCAGGAACT GGCGGCCGAG GTCGGCCATG CCGAGGCGAT GACCGCCGAC
ATCATGACGC CGGGGCTGGG TCTTCCCAAG GGGAAGCGCT TCAGTTGCTT CATCCCGATG
ATCAAGGATC GCGCCCTGTA CGGCATGACC CTGGCCGAGG AACAGCATAT CCCCTACGCG
GCCTTCTCCG AATATGTGTA CGACTTCGCG CCGTTCATCG CGCGGCACAT CCACAATCCG
AAAGGGGCCC CGCTGCTGCT GCTCGGCCAT CTGCACGGCG GATCGATGCC GGTCGCGGCG
CTCGAGCTCG CCAGGGGTTT CCGATCGATC GACAGGCTGA CGGTCAGCGC TATCTTCGAT
CCGGTCGATT TCGGCGGAGG CGGCTCCGCT TCCTCGAACA TGGTCACCGG CAATTTCGGC
GTGCCGTCCT ACCTCGTCCG GCGCGACCGC AAGTGGGAAT GGCGCCGCAA CGGATCGGAG
GCGTTGAGCA TCACCAGCAG CGACGGCCGC ACGCTGCCTG CGCATGGCTT CGCGCTGCCC
GACGTCATCA CCCTCGCCAA TGAGACGGGA GCCCGGTCGG TCGACATGGC CTTTGCGCTC
GACAAGACCG CGCGCTCCTT CCGGGGCGAA GGTATCTCGC ATGAAATATC CGTGGAGATC
GAGGGCGAAC GGCATGACGG CGTCCACGCC CGCGAGCGCT ACGAACTGGA GGACGAGGCG
GGCTATGCGG CGATGAGCGC GCGCGGGGCC GTCCTGTGCA TGGAACGGAT GATGGGCCTG
GCCGGCGGCC CGCCGGTCGG CCCCGGACTC TACAATCCGG AGACGCTGCT CGATCCCGCC
CATGTCGTGA AGCGGATGCA GCAGTTCGGC ACGAAGATAC GCAAGCTCTG A
|
|---|
| Protein sequence | MSLSSKEPVL FVGYGSVGSE AARSLRRLYP DLPFVIAGRR LEKAQELAAE VGHAEAMTAD
IMTPGLGLPK GKRFSCFIPM IKDRALYGMT LAEEQHIPYA AFSEYVYDFA PFIARHIHNP
KGAPLLLLGH LHGGSMPVAA LELARGFRSI DRLTVSAIFD PVDFGGGGSA SSNMVTGNFG
VPSYLVRRDR KWEWRRNGSE ALSITSSDGR TLPAHGFALP DVITLANETG ARSVDMAFAL
DKTARSFRGE GISHEISVEI EGERHDGVHA RERYELEDEA GYAAMSARGA VLCMERMMGL
AGGPPVGPGL YNPETLLDPA HVVKRMQQFG TKIRKL
|
|---|
| |