| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4050 |
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| Symbol | dcd |
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| ID | 5200872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4453986 |
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| End bp | 4454540 |
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| Gene Length | 555 bp |
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| Protein Length | 184 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640583607 |
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| Product | deoxycytidine triphosphate deaminase |
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| Protein accession | YP_001264532 |
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| Protein GI | 148556950 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0717] Deoxycytidine deaminase |
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| TIGRFAM ID | [TIGR02274] deoxycytidine triphosphate deaminase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGATCA TGTCGGACAA GTGGATCCGC GAACAGGCGA CGAAGAACGG GATGATCGAG
CCGTTCGTCG AGGCGCAGCG GCGCGACGGC TGCATCAGCT ACGGCCTCTC CTCCTATGGC
TATGACGCCC GCGTGGCGCC CGAGTTCAAG ATCTTCACCA ATGTCGATTC GGCAACGGTC
GACCCGAAGG ACTTCGCGTC GAACAGCTTC GTCGACCGCG AGACCGACGT CTGCATCATC
CCGCCGAACA GTTTCGCGCT GGCGCGCACC GTCGAATATT TCCGGGTGCC GCGCGACGTG
CTCGTCATCT GCCTCGGCAA GTCGACCTAT GCGCGCTGCG GCATCATCGT CAACGTGACC
CCGCTCGAAC CGGGCTGGGA AGGCCATGTC ACGCTCGAAT TCTCGAACAC CACCCCGCTC
CCCGCCAAGA TCTACGCGAA CGAGGGCGCC TGCCAGTTCC TGTTCCTCCA GGGCAACGAG
CCCTGCGAGA TCAGCTATGC CGACCGCGCC GGCAAATATA TGGGCCAGCA GGGCGTCACC
TTGCCGCGGC TGTAA
|
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| Protein sequence | MTIMSDKWIR EQATKNGMIE PFVEAQRRDG CISYGLSSYG YDARVAPEFK IFTNVDSATV
DPKDFASNSF VDRETDVCII PPNSFALART VEYFRVPRDV LVICLGKSTY ARCGIIVNVT
PLEPGWEGHV TLEFSNTTPL PAKIYANEGA CQFLFLQGNE PCEISYADRA GKYMGQQGVT
LPRL
|
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