| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4014 |
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| Symbol | |
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| ID | 5197070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4414813 |
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| End bp | 4415976 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640583572 |
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| Product | capsule polysaccharide export-like protein |
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| Protein accession | YP_001264497 |
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| Protein GI | 148556915 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3524] Capsule polysaccharide export protein |
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| TIGRFAM ID | [TIGR01010] polysaccharide export inner-membrane protein, BexC/CtrB/KpsE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGGAA TCATCAAGCC CCACGCCAGC CAGGAAGCCG CCGAGCAACG CTGGCCGGAC
GCCTTGCGCG GCTGGGCCCA TCGCAACAAA TGGTTCGTGC TGGTGGTGTT GGCGCCGACC
CTGCTCGTCG CCGCCTATTA TTATCTGTTC GCGTCCGACC AATATCAGTC GGAGGCGCAT
TTCATCGTCC GCACCGCGGA CAGCTCGCCG ATGCCGTCGA TGGGCTTCAG CCAGCTCCTC
GGCCTGGGCG GCGGCGCGTC GCAGTCGCGC AGCGAGGCGA TGAGCGTCAA CGACTATCTC
GATTCGCAGC AGGCCGTGGT CCTGCTCAAC CAGCGCGCGA ACCTGGTCGA GCGCTTCCGC
CGCCCGGAGG CCGACATCGC CACCCGGCTG TGGTTCGCGC AGCCGACCCC CGAAATGCTG
ATGCGCTACT ATCGCAAGCA GGTCGACGTG CGGTTCAACC AGGAGACGGG GATCACCACG
CTGCGCGTCC GATCCTTCCG GCCCGACGAT TCCTACGCGA TCATCAACCA GTTGCTGGGG
ATGGGCGAGG AACGGGTCAA CATGCTCAAC CGCCGCAGCC AGGCGGACGC GCTCAAGAAT
GCGCACCGCC AGCTCGGCGA GGCCGAACAG GGCCTGTTCG ACATCCAGCG CCAGCTGACC
GCCTTTCGTC AGCAGCGCGG CGACCTCGAC CCCGAGGTTT CGGGCAAGAC CCAGCTGAGC
CTGATCGCGA CGCTGCAGGG ACAGCTCACC AGCGCCCGCG CGCAGCTCAA CGCGATGCAG
GGGATCATCG CCCCGACCAG CCCGCAATAT GTCGCCGTCG CGGCTCGGGT CCGCGCGCTC
GAGGCGCAGG TCGCCGGCCA GGCCGGCAAG CTCACCGCCG GCGGCGGATC GACCGCGGCG
CGGCTGGGCA ATTACCAGGA CCTCCAGATC CGCCAGGAAT TCGCGGCGAA GCGCTACGAG
GTCGCCGCCG CCAACCTGGA GAAGGCGCGC GACACGGCGA CGAAGCAGCA GCTCTACATC
GTCCGCGTGG TCGACCCGAA CGTGCCGGTG AAGTCCGAAT TCCCCGAACG CGGCAAGATG
CTGCTGACGG TCTTCCTATC GCTGCTGATC GCCTATGGCA TCGGCTGGCT GCTGGCCGCC
GGCGTGCGCG AGCATTCGCT GTAG
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| Protein sequence | MHGIIKPHAS QEAAEQRWPD ALRGWAHRNK WFVLVVLAPT LLVAAYYYLF ASDQYQSEAH
FIVRTADSSP MPSMGFSQLL GLGGGASQSR SEAMSVNDYL DSQQAVVLLN QRANLVERFR
RPEADIATRL WFAQPTPEML MRYYRKQVDV RFNQETGITT LRVRSFRPDD SYAIINQLLG
MGEERVNMLN RRSQADALKN AHRQLGEAEQ GLFDIQRQLT AFRQQRGDLD PEVSGKTQLS
LIATLQGQLT SARAQLNAMQ GIIAPTSPQY VAVAARVRAL EAQVAGQAGK LTAGGGSTAA
RLGNYQDLQI RQEFAAKRYE VAAANLEKAR DTATKQQLYI VRVVDPNVPV KSEFPERGKM
LLTVFLSLLI AYGIGWLLAA GVREHSL
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