Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_3992 |
Symbol | |
ID | 5200644 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 4381805 |
End bp | 4382341 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640583549 |
Product | cytochrome C biogenesis protein |
Protein accession | YP_001264475 |
Protein GI | 148556893 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3088] Uncharacterized protein involved in biosynthesis of c-type cytochromes |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.37965 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGGCT TGCCTGAAAT CCTCCCCGCG CGCAGCGGGG GGAGGGGGAC CATCCGCAGG ATGGTGGAGG GGTGGCGCCG CCGGCGCCTT CTTCCGAAGG CGCCCCCCTC CACCGGCTTC GCGCGGGGAG GATTTTTGGC GGCGGCGCTG CTGCTCGCCG TCTCCGCCCC CGTCTTCGCC GACTCGCTGA TGCCGGCGGC GAAATATGCC GACGAGCAGC TCGCCGATCC GGGCAAGGAG AAGCAGGCCA AGGCGCTGAT GGAGACGATC CGCTGCCTCG TCTGCCAGGG CCAGTCGATC GCCGATTCGA ACGCGGAGAT GGCCGGCGAC ATGCGCGCGC TGATCCGCAC CCGGATCGAG GCGGGCGAGA AGCCCGAGGC GATCCGCGCC TGGCTGATCG AGCGCTATGG CGACTGGGTG AGCTTCAAGC CGCCGCTCGA CGGGCTGACC TGGCCGCTCT ACGTGGTGCC GGTCCTGTTC CTCGGCCTCG GCTTCTGGAT CGTGAGTGGG CGCCTCAAGC GCCGGAGGAA AGGCTGA
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Protein sequence | MKGLPEILPA RSGGRGTIRR MVEGWRRRRL LPKAPPSTGF ARGGFLAAAL LLAVSAPVFA DSLMPAAKYA DEQLADPGKE KQAKALMETI RCLVCQGQSI ADSNAEMAGD MRALIRTRIE AGEKPEAIRA WLIERYGDWV SFKPPLDGLT WPLYVVPVLF LGLGFWIVSG RLKRRRKG
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