Gene Swit_3992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3992 
Symbol 
ID5200644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4381805 
End bp4382341 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content70% 
IMG OID640583549 
Productcytochrome C biogenesis protein 
Protein accessionYP_001264475 
Protein GI148556893 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3088] Uncharacterized protein involved in biosynthesis of c-type cytochromes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.37965 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGGCT TGCCTGAAAT CCTCCCCGCG CGCAGCGGGG GGAGGGGGAC CATCCGCAGG 
ATGGTGGAGG GGTGGCGCCG CCGGCGCCTT CTTCCGAAGG CGCCCCCCTC CACCGGCTTC
GCGCGGGGAG GATTTTTGGC GGCGGCGCTG CTGCTCGCCG TCTCCGCCCC CGTCTTCGCC
GACTCGCTGA TGCCGGCGGC GAAATATGCC GACGAGCAGC TCGCCGATCC GGGCAAGGAG
AAGCAGGCCA AGGCGCTGAT GGAGACGATC CGCTGCCTCG TCTGCCAGGG CCAGTCGATC
GCCGATTCGA ACGCGGAGAT GGCCGGCGAC ATGCGCGCGC TGATCCGCAC CCGGATCGAG
GCGGGCGAGA AGCCCGAGGC GATCCGCGCC TGGCTGATCG AGCGCTATGG CGACTGGGTG
AGCTTCAAGC CGCCGCTCGA CGGGCTGACC TGGCCGCTCT ACGTGGTGCC GGTCCTGTTC
CTCGGCCTCG GCTTCTGGAT CGTGAGTGGG CGCCTCAAGC GCCGGAGGAA AGGCTGA
 
Protein sequence
MKGLPEILPA RSGGRGTIRR MVEGWRRRRL LPKAPPSTGF ARGGFLAAAL LLAVSAPVFA 
DSLMPAAKYA DEQLADPGKE KQAKALMETI RCLVCQGQSI ADSNAEMAGD MRALIRTRIE
AGEKPEAIRA WLIERYGDWV SFKPPLDGLT WPLYVVPVLF LGLGFWIVSG RLKRRRKG