| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3981 |
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| Symbol | |
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| ID | 5197630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4370839 |
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| End bp | 4371696 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640583537 |
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| Product | Ku family containing protein |
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| Protein accession | YP_001264464 |
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| Protein GI | 148556882 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1273] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02772] Ku protein, prokaryotic |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.288761 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCGC GCGCCTATTG GCAGGGACAG ATCCGCCTCG CGCTCGTCTC GATCCCGGTC
GAGATCTATC CCGCGACCGG CAGCGGGGCG CAGGTCGCCT TCCACCAGAT CCACGAACCG
TCGGGCAAGC GGATCAAATA TGAGAAGGTG GTGCCCGGTA TCGGGCCGGT CGATACCGAC
GACATCGTCA AGGGCTATGA GGTGTCGAAG GGCAATTACG TCCTGCTCGA ACAGGACGAG
ATCGACGCGG TCAAGCTGGA GAGCAAGCGT ACACTGGAAC TGGTCCAGTT CGTCGATTCG
CACGAGATCG ACGTGCTCTA CTTCGACAAG CCCTATTATG TCGTCCCCGC CGACGAGCTG
GCCGAGGAGG CGTTCATCGT GCTGCGCGAG GCGCTGCGCC GCACCCGCAA GGTCGGGCTG
GGGCAGCTCG CGATGCGCGG GCGCGAATAT GTCGTCAGCC TGAAGCCCTG CGGGCGCGGC
ATGGTTCTGG AGACGCTCCG CTACGCCGAC GAGGTGCGCA AGGCGCAGGG CTATTTCCGC
GACATCCCCG ACAGCAAGCC CGATGCCGAC CTGCTCGACC TGGCCGAAAC GCTGATCGAC
AAGAAGAGCG CCAGGTTCGA CGCCAACGAG TTCCACGACC GCTATGTCGA TGCCCTCAAG
GCGCTGATCG AGAAGAAGCG CAAGGGGAAG GGCAGGAAGG TCATCGAGGA GGCCGAGGAG
GCTCCGGCGC GCAAGGGCAA CGTCATCGAC CTGATGGCCG CGCTCAAGAG GTCGGTCGAG
GGCGGGAGCG CCGCGAAGGC GACGCCCGCG CGGAAGGCGG CCCCGCCGCG CAAGGCGCCC
GCCCGCAAGC GGGCCTGA
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| Protein sequence | MAARAYWQGQ IRLALVSIPV EIYPATGSGA QVAFHQIHEP SGKRIKYEKV VPGIGPVDTD
DIVKGYEVSK GNYVLLEQDE IDAVKLESKR TLELVQFVDS HEIDVLYFDK PYYVVPADEL
AEEAFIVLRE ALRRTRKVGL GQLAMRGREY VVSLKPCGRG MVLETLRYAD EVRKAQGYFR
DIPDSKPDAD LLDLAETLID KKSARFDANE FHDRYVDALK ALIEKKRKGK GRKVIEEAEE
APARKGNVID LMAALKRSVE GGSAAKATPA RKAAPPRKAP ARKRA
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