Gene Swit_3950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3950 
SymbolmraY 
ID5197915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4336702 
End bp4337772 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content66% 
IMG OID640583506 
Productphospho-N-acetylmuramoyl-pentapeptide- transferase 
Protein accessionYP_001264433 
Protein GI148556851 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID[TIGR00445] phospho-N-acetylmuramoyl-pentapeptide-transferase 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTACC TGATAGCCGA GCAGCTCGGG TTCCCGGGCG TGCTCAATCT CATCCGCTAC 
ATCACCTTCC GCGCGGGGGC GGCGGCGCTG ACCGCGCTGT TCATCGGCCT GATCATCGGC
CCGCGCTTCA TCGGCTGGCT GCGCATCCGC CAGGGCAAGG GTCAGCCGAT CCGCGCCGAC
GGCCCGCAGA CCCACCTGTC CAAGGTCGGC ACGCCGACGA TGGGCGGGCT GATGATCCTG
ATCTCGGTGA TGCTGTCGCT GCTGCTGTGG ATGGACCTGG GCAACCGCTA TGTCTGGGCC
TGCATCGGCG TGACGCTGGG CTTCGGCCTG ATCGGCTTCA TGGACGATTA CGACAAGGTC
AAGAAGCGCA GCACCAAGGG CGTCTCGGGC AAGGCCCGCC TGCTGGGCGA GTTCCTGATC
GCCGGCCTCG CGAGCTGGCT GATCGTGTCG GGCAACGGCA CCCAGCTCTA CGTGCCCTTC
TACAACGGCC CGGTGATCGA CCTCGGCCCC TTCTACGTCG TGTTCGCGGC GTTCGTGATC
GTCGCCTTCG GCAATGCGGT GAACCTGACC GACGGGCTCG ACGGCCTCGC GATCATGCCG
GTGGTGATCG CCAGTCTCGC CTTCTTCGTC ATCGCCTATC TCGTCGGCAA CGCGAAATTC
GCCCAGTATC TGGGCATTCC GCACGTGCCC GGCGCGGGCG ACCTGACGAT CCTGACCGCA
GCGATCATCG GCGGCGGCCT CGCCTTCCTG TGGTTCAACG CGCCGCCCGC CGCCGTGTTC
ATGGGCGACA CCGGCAGCCT CGCCCTCGGC GGCGCGCTCG GCGTCATCTC GGTCGTCGCG
CATCACGAGA TCGTGCTGGC GATCGTCGGC GGCCTGTTCG TGATGGAGAC GATCTCGGTC
ATCCTGCAGG TCTTCTTCTA CAAGCGGACC GGCAAGCGCA TCTTCCGCAT GGCGCCGATC
CACCATCATT TCGAACAGCT CGGCTGGAGC GAGCCGACCG TGGTGATCCG CTTCTGGATC
ATCTCCTTCG TCCTCGCCCT CGCCGGCCTC GCCACGCTGA AGCTGCGGTG A
 
Protein sequence
MLYLIAEQLG FPGVLNLIRY ITFRAGAAAL TALFIGLIIG PRFIGWLRIR QGKGQPIRAD 
GPQTHLSKVG TPTMGGLMIL ISVMLSLLLW MDLGNRYVWA CIGVTLGFGL IGFMDDYDKV
KKRSTKGVSG KARLLGEFLI AGLASWLIVS GNGTQLYVPF YNGPVIDLGP FYVVFAAFVI
VAFGNAVNLT DGLDGLAIMP VVIASLAFFV IAYLVGNAKF AQYLGIPHVP GAGDLTILTA
AIIGGGLAFL WFNAPPAAVF MGDTGSLALG GALGVISVVA HHEIVLAIVG GLFVMETISV
ILQVFFYKRT GKRIFRMAPI HHHFEQLGWS EPTVVIRFWI ISFVLALAGL ATLKLR