Gene Swit_3940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3940 
Symbol 
ID5199644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4325402 
End bp4326889 
Gene Length1488 bp 
Protein Length495 aa 
Translation table11 
GC content70% 
IMG OID640583496 
Productcell division protein FtsZ 
Protein accessionYP_001264423 
Protein GI148556841 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0206] Cell division GTPase 
TIGRFAM ID[TIGR00065] cell division protein FtsZ 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCG AGTTCATGCG CCCGCAGGTC GATGAGCTGA AACCCCGGAT CAGCGTGATC 
GGCGTTGGCG GGGCGGGCGG AAACGCGGTC GCCAACATGA TCGGCGCGGA CGTGCAGGGC
GTCGACTTCA TCGTCGCCAA CACCGACGCG CAGGCGCTCA ACGCCTCGTC GGCGGAGCGC
CGCATCCAGC TCGGTCTCAA GATCACCCAG GGCCTGGGCG CCGGCAGCCG TCCCGAAATA
GGACGGGCGG CCGCCGAGGA GACCCTCGAG CAGGTCGAGA AGGCGCTCGA AGGATCGCAC
ATGTGCTTCA TCGCCGCCGG CATGGGCGGC GGCACCGGCA CCGGCGCCGC CCCGGTCATC
GCCAAGGCGG CGCGCGACCG CGGCATCCTG ACCGTCGGCG TCGTCACCAA GCCGTTCAGC
TTCGAGGGCA ACCGCCGCAT GCGTTCGGCC GACGCCGGCA TCGAGGAGCT GCAGAAGCAC
GTCGACACGC TGATCGTCAT CCCGAACCAG AACCTGTTCC TGATCGCCAA CCCGAACACG
ACCTTCAAGG AAGCGTTCCA GATGGCCGAC CAGGTGCTGC AGCAGGGCGT GCGCGGCATC
ACCGACCTGA TGGTCATGCC CGGCCTGATC AACCTCGACT TCGCCGACGT CCGCTCGGTG
ATGAGCGAGA TGGGCAAGGC GATGATGGGC ACCGGCGAGG CGAGCGGCGA CAACCGCGCG
ATCGAGGCCG CCGAGAAGGC GATCGCCAAT CCGCTGCTCG ACGGCGTCAG CCTGAACGGC
GCCAAGGGCG TGATCGTGTC GATCACCGGC GGCGACGACA TGCGCCTGCT GGAGGTCGAC
GAAGCCGCCA ACCACATCCG CCAGCTCGTC GATCCCGACG CGAACATCAT CTGGGGCTCG
GCGTTCAACA ACGAGCTCGA GGGCCGCATC CGCGTCTCGG TGGTCGCGAC CGGCATAGAG
GTCGACGCCG CGACGATGCC CGAGCCGTCG AAGAGCTTCA GCTTCCCGCC GCGCACCCCG
ATCCGCGACG ACAAGCCGGT CGTGGTGCCG CAGACCCCGG CCCCCGCGCC GCAGGCCGAG
GCCCCCGCCG CGCAGTCGCA GGCCGCCCAG CCCGAGGCGC CCGCTACGCC GGCCGCCGCC
GAAGCCCCGG CCGAGGAGAA GATCGTCCTC GAAGCGCCCG AGCAGGCCGC TGCCGCCGAG
CCGCTCGAGC TGACCAACCT GTTCAACGAC GAGCTGCTGC TCCAGCCGGA ATCGGCGATG
CCGACCCCGG CGCCGGAAGC GCCCGCCGAC GAGGACGCCG CATCGCAGGG CAATCGCCGC
TGGGTGACCG ACGCCGAGCC GGCCCGCCGC CCGTCGGGCG CCGGATCGAC CCTGTTCGAG
CGGATGTCGA ACATCGCGCG CGGCGCCGCC AAGGCGCAGG TCGACGATGA TCGCGGCGGC
GACGATGCCG ACATCCCGCG CTTCCTGAAC CGCCAAAGCA ACCAGTAA
 
Protein sequence
MTIEFMRPQV DELKPRISVI GVGGAGGNAV ANMIGADVQG VDFIVANTDA QALNASSAER 
RIQLGLKITQ GLGAGSRPEI GRAAAEETLE QVEKALEGSH MCFIAAGMGG GTGTGAAPVI
AKAARDRGIL TVGVVTKPFS FEGNRRMRSA DAGIEELQKH VDTLIVIPNQ NLFLIANPNT
TFKEAFQMAD QVLQQGVRGI TDLMVMPGLI NLDFADVRSV MSEMGKAMMG TGEASGDNRA
IEAAEKAIAN PLLDGVSLNG AKGVIVSITG GDDMRLLEVD EAANHIRQLV DPDANIIWGS
AFNNELEGRI RVSVVATGIE VDAATMPEPS KSFSFPPRTP IRDDKPVVVP QTPAPAPQAE
APAAQSQAAQ PEAPATPAAA EAPAEEKIVL EAPEQAAAAE PLELTNLFND ELLLQPESAM
PTPAPEAPAD EDAASQGNRR WVTDAEPARR PSGAGSTLFE RMSNIARGAA KAQVDDDRGG
DDADIPRFLN RQSNQ