| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3939 |
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| Symbol | |
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| ID | 5199643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4323876 |
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| End bp | 4325327 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640583495 |
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| Product | sporulation domain-containing protein |
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| Protein accession | YP_001264422 |
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| Protein GI | 148556840 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGGACGA TAAGGCGGAT GTCCGAAAGC GATGTGCCCA TGAAAAGAAA CAGCTTCGTC
AGCCTCCTCG CGCTGGCTTC CGCCTTCCTG ATCATCCCCC CCGCCGCCGC GCAGATGGAT
TCGGCCACGG CCGGCGATGA GCCGGTGATC ACCGATCCGA TGGCCCAGGC CCGCGACGCG
ATGGCGCGCG GCGACCCCGC CGAGGCGCTG TCCCGCTATC TGCGCGTGCT GGCGCGCGAC
CCCGGCGACC TCGACGCCCT GTCGGGCGCC GGATCGGCGG CGCTCGCGGT CGGCGACGCC
GATGCCGCGA TCAACTTCTT CGTCCGGGCC GAGAAGATCT CGCCGCGCGA CGGCCGGGTC
AAGGCGGGCC TCGGCTCCGC GCTGGTCCAG AAGGAGCAGC CCCGCGCCGC CCTGCGCCTG
TTCGACAATG CGACCGACCT GGGCGTGCCG CCGGTCGACG TCGCGCTCGA CCGCGGCCTC
GCCTACGACC TGCGCGGCGA GACCAGGAAG GCGCAGGCCG AATATAATCT GCTGCTCCGC
GCCCGCCCCG ACGCCGAGGC GACCCGCCGG CTGGCGCTGT CGCTGGCGAT GAGCGGCGAC
AAGGTCGGCG CGCTCGCCAC CCTCGATCCG CTGCTGCAGA AGCGCGACAT CGCCGCCTGG
CGCGCGCGCG CCTTCGTGCT GGCGATGACC GGCGACACGG CGGGTGCGGA ATCCGCCGCC
TATGCGGTGC TGCCGCGCTA CCAGGCCGAC GCGCTCCGGC CTTTCCTGTC GCGCCTGCCC
ACGCTCAAGG CCGCCGAAAA GGCCGCCGCC GTCCATTTCG GCCATTTCCC CGAGGACAAG
GTCCCGATGG AGATGGCGCA GGTCAGCCCG GTTCCGGCGT CCAAGGGCAT GCCGGTCGCG
GCGGCGCCCC AGCCGTCCCC ATCCTACTCC TCCACGCCCG CGACCCGCCC GCGCTTCGAC
AGCAGCGGCC GGCTGGTGAT GAAGCCCGAC GCCGCCGCGC CGACGACGTC GACCTCGGCC
TCGGCCGAAC CCTCGCCCGC ACGGCAGGCC GCCGAACAGA AGGCCGCCGA CGAGCGCAGC
CTCGCCGAGG ATCGCCGCGC CGCCCAGCGC AAGGCCGCCG CCGAGAAAGC CGCCGCCGAG
AAGAAGGCGA AGGCGCAGGA GGAAGCCAAG ACCCGCAAGT CAAACCCCGA ACGCTATTGG
GTCCAGATCG CGAGCGGCGC CTACAAGCCC GACCTCGACA AGGAATGGGA CAAGCAGAAG
AAGGCCCATG GCAAGCTGCT CGCGGGCAAG ACGCCGTGGA CCACGCCCTT CAAGGCGACC
AACCGGCTGC TGATCGGTCC CTTCCCCAGC AAGGGCGCCG CGCAGGACTA TGTGAACGAC
GCGCGCGCCG CCGGGCTGAG CAGCTTCCCG GTCACCACCT CGGCCGGGCA GAAGGTGGAA
CGGGTCGATT AG
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| Protein sequence | MRTIRRMSES DVPMKRNSFV SLLALASAFL IIPPAAAQMD SATAGDEPVI TDPMAQARDA
MARGDPAEAL SRYLRVLARD PGDLDALSGA GSAALAVGDA DAAINFFVRA EKISPRDGRV
KAGLGSALVQ KEQPRAALRL FDNATDLGVP PVDVALDRGL AYDLRGETRK AQAEYNLLLR
ARPDAEATRR LALSLAMSGD KVGALATLDP LLQKRDIAAW RARAFVLAMT GDTAGAESAA
YAVLPRYQAD ALRPFLSRLP TLKAAEKAAA VHFGHFPEDK VPMEMAQVSP VPASKGMPVA
AAPQPSPSYS STPATRPRFD SSGRLVMKPD AAAPTTSTSA SAEPSPARQA AEQKAADERS
LAEDRRAAQR KAAAEKAAAE KKAKAQEEAK TRKSNPERYW VQIASGAYKP DLDKEWDKQK
KAHGKLLAGK TPWTTPFKAT NRLLIGPFPS KGAAQDYVND ARAAGLSSFP VTTSAGQKVE
RVD
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