| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3928 |
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| Symbol | |
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| ID | 5200367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4313589 |
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| End bp | 4314356 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640583484 |
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| Product | Sec-independent protein translocase TatC |
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| Protein accession | YP_001264411 |
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| Protein GI | 148556829 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
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| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACA TCGACGACAG CCGCGCGCCG CTGCTCGACC ATCTCCTGGA ACTGCGCCGC
CGCCTGCTGA TGGCATTCGC GGCGCTCGCG GTCGCGTTCG GCATCTGCCT CTATTTCGCC
CGCCCGATCT TCGCCTTCCT CGTCCAGCCG CTGCTGCGCG CGGGCCAGGG CAAGCTGATC
TACACCCAGA TCTTCGAAGC CTTCTTCGTC GAGATCAAGG TCGCCTTCTT CGCCGCGATG
ATGCTGGCCT TTCCCGTCAT CGCCAACCAG ATCTGGCAGT TCGTCGCGCC GGGACTCTAC
AAGAACGAGA AGCGCGCCCT CCTGCCCTTC ATCTTCGCGA CGCCGATCCT GTTCCTGTCG
GGGGCCGCGC TCGCTTATTA TGTCGCGATC CCCGTCGCGC TCCATTTCCT GCTCGGCTTC
CAGGGCAATC TGGGCGGCGT CCAGCAGGAA GCCCTGCCGG CGGTCGGCAA CTACCTGTCC
TTCGTGATGC AGTTCCTGTT CGGCTTCGGC CTGTCCTTCC TGCTGCCGGT GCTGCTGATG
CTGCTCGAAC GCGCCGGGAT CGTCACCCGC AAGCAGCTCG TCGGCGCGCG GCGCTACGCG
ATCGTCGGCG CCTTCGCGAT CGCGGCGGTG CTGACCCCGC CCGACGTGGG CTCGCAGCTC
CTGCTCGCGG TCCCGCTGAT CATCCTCTAC GAACTGGCGC TGATCGGCAT CTGGTTCACC
GAGCGGCGGC GCAAGACCGG GGATGAGGAA AAGCCCGAGA CGGCCTGA
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| Protein sequence | MNDIDDSRAP LLDHLLELRR RLLMAFAALA VAFGICLYFA RPIFAFLVQP LLRAGQGKLI
YTQIFEAFFV EIKVAFFAAM MLAFPVIANQ IWQFVAPGLY KNEKRALLPF IFATPILFLS
GAALAYYVAI PVALHFLLGF QGNLGGVQQE ALPAVGNYLS FVMQFLFGFG LSFLLPVLLM
LLERAGIVTR KQLVGARRYA IVGAFAIAAV LTPPDVGSQL LLAVPLIILY ELALIGIWFT
ERRRKTGDEE KPETA
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