Gene Swit_3899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3899 
Symbol 
ID5199997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4283799 
End bp4284041 
Gene Length243 bp 
Protein Length80 aa 
Translation table11 
GC content61% 
IMG OID640583455 
Producthypothetical protein 
Protein accessionYP_001264382 
Protein GI148556800 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0236] Acyl carrier protein 
TIGRFAM ID[TIGR00517] acyl carrier protein 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGCA GAGAAGACAT CTTCACCCGC GTCGCCGAGC AGATCGAGCC GTTCAACAAG 
AAGGGCATCG ACCTGGCTGA GACGACGAGC TTCGCCGGCG ACCTCGAATG GGACAGCCTG
ACGGTCATGG ATTTCGTCGC GGCGGTGGAG GATGAGTTCG ACATCATCAT CACGATGAAC
ATGCAGGCCG AGATCGAGAC CGTCGGCCAG CTCGTCGATG CCGTCGCCAA GCTGCGGGGC
TGA
 
Protein sequence
MSSREDIFTR VAEQIEPFNK KGIDLAETTS FAGDLEWDSL TVMDFVAAVE DEFDIIITMN 
MQAEIETVGQ LVDAVAKLRG