Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_3859 |
Symbol | |
ID | 5197979 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 4245259 |
End bp | 4246299 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640583414 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001264342 |
Protein GI | 148556760 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTCCCC CCGCTCCCTT TCCATCGCTG ACCGTCGACG CGGTCCGCCC CCTGCTCGGC GTCATGGAAG CGGCCGGACT CGCCCCGGCG CATGTCCTGC GGCGCGCGGG CCTCCCGACC GACCTGTTCG CGGGGCCGGG AAACGGCGCG CTGCGCCTGT CCGACTATTT CCGCATCTGC GAGCAGATGG CGCTGCTCGG CGGCGACGAG AGCTGCCATG TCTCGCTGCG GCCGCTGATG GTCGGCACGT CCGAGCTGGT CCAGGCCCGG CTGCGCGGCT GCACGACGAT GGCGGAGGTG ATGGAGGTGC TGGCCAACAG CTACAACATC ATCCACGGCC ATCGCTACAA CCAGGTCCAG CGGCGCGGGC CGTTGATCAG CTACGCGATC GACGACGCCG ACTTCCCCTA TGCGTTCGAC CCGGACGACG CCTTCGTCAT CCTCTCGCTC GAATGCCTGC TCGTCTACGT CCATGTCCTG CTGCTATCGC TCGCGCCGGG CGCCGGGCCG ATCCCGCTCC GTTCGGTCCG CACCCGCGGC CCCGCCGCCG GCCGCAGCCA CCTCGCCTTC CTCGGCGTGC CGGTGAAGGC CTCGGCCGGC CTGTTCGGGC TCGACTATGA CGCGGCGCTC GAAGGCGTCG GCGTCGCCCC GGCGCAGAGC CCGGTGCTGT CGGCGCGCAC CATCTATGGC GGGGTCGCCG ACATGCTCGA CCGGATCGGG CCGGTCGCGG CGGACGCGCC CGACGTCATC GGCCGGGTCG AGCGCGAGCT CGCGCGCGGG CGGCTCGACC AGGCCGAGGT CGCGTCGGCG CTGGGGATGA GCGTCGCCTC GCTCCGCCGC CGGCTCGCCG AGGCCGGGCT CGCCTTCCGC GACCTGCGCG CGCGCTATCT GAACAGCATC GCGCGGGCGG CGCTGGAGGA CGGCGGCAGC ATCGCCGACA TCGCCGAAAC CCTCGGCTTC TCGGACGGAC GCAGCTTCGC GCGCGCCTTC CGCCAGTGGA ACGGCGTCGC GCCGGGGGAC TATCGCCGCA GCACCGACTG A
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Protein sequence | MSPPAPFPSL TVDAVRPLLG VMEAAGLAPA HVLRRAGLPT DLFAGPGNGA LRLSDYFRIC EQMALLGGDE SCHVSLRPLM VGTSELVQAR LRGCTTMAEV MEVLANSYNI IHGHRYNQVQ RRGPLISYAI DDADFPYAFD PDDAFVILSL ECLLVYVHVL LLSLAPGAGP IPLRSVRTRG PAAGRSHLAF LGVPVKASAG LFGLDYDAAL EGVGVAPAQS PVLSARTIYG GVADMLDRIG PVAADAPDVI GRVERELARG RLDQAEVASA LGMSVASLRR RLAEAGLAFR DLRARYLNSI ARAALEDGGS IADIAETLGF SDGRSFARAF RQWNGVAPGD YRRSTD
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