| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3859 |
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| Symbol | |
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| ID | 5197979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4245259 |
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| End bp | 4246299 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640583414 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001264342 |
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| Protein GI | 148556760 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTCCCC CCGCTCCCTT TCCATCGCTG ACCGTCGACG CGGTCCGCCC CCTGCTCGGC
GTCATGGAAG CGGCCGGACT CGCCCCGGCG CATGTCCTGC GGCGCGCGGG CCTCCCGACC
GACCTGTTCG CGGGGCCGGG AAACGGCGCG CTGCGCCTGT CCGACTATTT CCGCATCTGC
GAGCAGATGG CGCTGCTCGG CGGCGACGAG AGCTGCCATG TCTCGCTGCG GCCGCTGATG
GTCGGCACGT CCGAGCTGGT CCAGGCCCGG CTGCGCGGCT GCACGACGAT GGCGGAGGTG
ATGGAGGTGC TGGCCAACAG CTACAACATC ATCCACGGCC ATCGCTACAA CCAGGTCCAG
CGGCGCGGGC CGTTGATCAG CTACGCGATC GACGACGCCG ACTTCCCCTA TGCGTTCGAC
CCGGACGACG CCTTCGTCAT CCTCTCGCTC GAATGCCTGC TCGTCTACGT CCATGTCCTG
CTGCTATCGC TCGCGCCGGG CGCCGGGCCG ATCCCGCTCC GTTCGGTCCG CACCCGCGGC
CCCGCCGCCG GCCGCAGCCA CCTCGCCTTC CTCGGCGTGC CGGTGAAGGC CTCGGCCGGC
CTGTTCGGGC TCGACTATGA CGCGGCGCTC GAAGGCGTCG GCGTCGCCCC GGCGCAGAGC
CCGGTGCTGT CGGCGCGCAC CATCTATGGC GGGGTCGCCG ACATGCTCGA CCGGATCGGG
CCGGTCGCGG CGGACGCGCC CGACGTCATC GGCCGGGTCG AGCGCGAGCT CGCGCGCGGG
CGGCTCGACC AGGCCGAGGT CGCGTCGGCG CTGGGGATGA GCGTCGCCTC GCTCCGCCGC
CGGCTCGCCG AGGCCGGGCT CGCCTTCCGC GACCTGCGCG CGCGCTATCT GAACAGCATC
GCGCGGGCGG CGCTGGAGGA CGGCGGCAGC ATCGCCGACA TCGCCGAAAC CCTCGGCTTC
TCGGACGGAC GCAGCTTCGC GCGCGCCTTC CGCCAGTGGA ACGGCGTCGC GCCGGGGGAC
TATCGCCGCA GCACCGACTG A
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| Protein sequence | MSPPAPFPSL TVDAVRPLLG VMEAAGLAPA HVLRRAGLPT DLFAGPGNGA LRLSDYFRIC
EQMALLGGDE SCHVSLRPLM VGTSELVQAR LRGCTTMAEV MEVLANSYNI IHGHRYNQVQ
RRGPLISYAI DDADFPYAFD PDDAFVILSL ECLLVYVHVL LLSLAPGAGP IPLRSVRTRG
PAAGRSHLAF LGVPVKASAG LFGLDYDAAL EGVGVAPAQS PVLSARTIYG GVADMLDRIG
PVAADAPDVI GRVERELARG RLDQAEVASA LGMSVASLRR RLAEAGLAFR DLRARYLNSI
ARAALEDGGS IADIAETLGF SDGRSFARAF RQWNGVAPGD YRRSTD
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