| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3713 |
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| Symbol | |
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| ID | 5201032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4077994 |
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| End bp | 4078962 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640583269 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001264197 |
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| Protein GI | 148556615 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATGCCC GTCGCGCGAC GCAAATGGGA ATCCGCATTG CTCCAGCGAC AGCGGCCGAG
GAAGCGCCGC TCGCTACCAT ACCCGCGATG ATTCAGCCCC CCGCCAATGC CCGTGTGGCG
GTGGCGGCAA CCTTTCCTGG TACGGTGGTG CGAACCCTCG TGGTCGAAGG TGACAGCGTG
AAACGCGGGC AGCCGCTCGC CATCATCGCG AGCCGCGACG TGCTGACGAT CGGCGCTGAT
CTCAGCCGGG CCCATGCGCG CAGCGGCGTG GCACAGGCCA ATGCGGCGCG ATTGTCGCAG
CTCAGCCGCG AAGGCATCAT CGCCGGCGCT CGCGCGGATG AAGCCAATGC CGTCGCTGCC
GAGGCACGCG CCGACGTTTC GGAGAAATCG CGCATCCTGG CGCTGGTGAA TGGCCATGGC
GGCAACGGTT CTTATACGCT CACCGCCCCC ATCGCGGGGC GCGTTACCAG TGCCGCGATC
CAGGCGGGCA ATCCGGTCGA CGGCACCACC GCGCCCTATG TGATCGACGC GGCGGATCGC
TATGAGGTGG TCGGGCAATT GCCGGAGCGG CTGATTGGAC AAGTCCGCCC CGGCATGAGC
GTGCGGCTGC TTCCCGATCT TGTGGGCCGG ATCATTGCGG TGGGATCGAC GATCGATCCG
ACCACCCGCT CGGCGAGCCT CAAGGCGGAG ATCCCCGGTG GCCCCGGCAT GGTCGCGGGC
CGGGCCACCA GCATCGTGAT CGCTGGCCCC GCGCCAGCGG ACGCGGCGAG CGTGCCCGAT
GCCGCCGTCA CCATGATTGG CGGCAAAGCG GCGGTGTTCG TCGCCGTGCG CGGCGGCTTC
GTGGCCCGGT CCGTCACAAG CGGGGGGAGC AGTAACGGCC GCACCGTGCT GCTCTCCGGA
GTCAGCCCAG GTGAGCCGGT GGTGATCTCT GGTACGAGCG CGCTGAAGGC GCTCGCCTCG
GCGCAGTAG
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| Protein sequence | MDARRATQMG IRIAPATAAE EAPLATIPAM IQPPANARVA VAATFPGTVV RTLVVEGDSV
KRGQPLAIIA SRDVLTIGAD LSRAHARSGV AQANAARLSQ LSREGIIAGA RADEANAVAA
EARADVSEKS RILALVNGHG GNGSYTLTAP IAGRVTSAAI QAGNPVDGTT APYVIDAADR
YEVVGQLPER LIGQVRPGMS VRLLPDLVGR IIAVGSTIDP TTRSASLKAE IPGGPGMVAG
RATSIVIAGP APADAASVPD AAVTMIGGKA AVFVAVRGGF VARSVTSGGS SNGRTVLLSG
VSPGEPVVIS GTSALKALAS AQ
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