| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3703 |
|---|
| Symbol | |
|---|
| ID | 5198452 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 4064898 |
|---|
| End bp | 4065845 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640583259 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001264187 |
|---|
| Protein GI | 148556605 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCGAGC TACGGCAGCT TCGCTATCTA ATAGCAGCCG CAGAAGCAGG GAGTTTCAGC
CGCGCGGCGC GCAACCTCAA CATCAAGCAG CCGACGCTGA GCCGCTACAT CCTCGAAACC
GAGAAGCGGC TGGGCATGGC GCTGTTCGAC CGTAAGACGC GCGGCGCCAC CCTGACGGCG
GACGGGGCGA CCTATCTGCG GGTCGCCAAG CGGATCATGA AGGAGTGGGA CGAGCTGGAC
GCCTGGGTCA GCGCCACGAC CAACGGCCAT GCCGGCAAGC TGGCGGTAGG CTTCTACACG
TCCTTCTCGG CGGGAAACCT GCGCGCGACC CTGAGCAAGT TCGGCGAGCG CCATTCCGAG
GTGAAGCTGC GCGGGTTCGA GCGCGACCGC GAGATGCTGC TGGCCGGCAT CGAGAACGGG
CTGCTCGACA TCGCCATCAT GATCGGCGAG GCGCCGCATC CAGGGCTGAT GAGCCGCTCG
TTCTGGAGCG AGCGCATCCT GGTGGCGATG CCCGAAAGCC ACGCGCTTGC GACCCGCGAA
CGCATCCACT GGACCGACCT GACCGGCGAG CGGTTCTTGC TCACCGAGCA AGATCCCGGT
CCCGAGACGC GCAACATGCT CCTCGGCAAG CTCGGGATGC CGGGCTACTC ACCGGAGATC
GACATGGACG ACATCAGGCG GGACACTGTG CTGAGCGTCA TTGCGCTCGG CGGGTATATC
TCGATCGTCG CGGAATCGGC GCTCGGCATC CACGTCCCCG GCGTGGTCTT CCGCGAGGTC
CACGAGGCCA ACGGGCACAC GCGGATCGGC TTCTCGGGCT ATTGGCGCGA GGACAATGAA
AATCCGGTGC TGCGCCGGTT TCTTGAGTTC GTCACCGCCC GCTATTCGAT GCCGTCCATG
CCTGGGCCGC AACCACTGTC TCAGCAACCG GGAAAGGAGC CGTCATGA
|
|---|
| Protein sequence | MIELRQLRYL IAAAEAGSFS RAARNLNIKQ PTLSRYILET EKRLGMALFD RKTRGATLTA
DGATYLRVAK RIMKEWDELD AWVSATTNGH AGKLAVGFYT SFSAGNLRAT LSKFGERHSE
VKLRGFERDR EMLLAGIENG LLDIAIMIGE APHPGLMSRS FWSERILVAM PESHALATRE
RIHWTDLTGE RFLLTEQDPG PETRNMLLGK LGMPGYSPEI DMDDIRRDTV LSVIALGGYI
SIVAESALGI HVPGVVFREV HEANGHTRIG FSGYWREDNE NPVLRRFLEF VTARYSMPSM
PGPQPLSQQP GKEPS
|
|---|
| |