| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3691 |
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| Symbol | |
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| ID | 5200333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4054979 |
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| End bp | 4055965 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640583247 |
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| Product | P-type conjugative transfer ATPase TrbB |
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| Protein accession | YP_001264175 |
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| Protein GI | 148556593 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | [TIGR02782] P-type conjugative transfer ATPase TrbB |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCCATCC AACCGATCCG TTCCTTGGGG GAAACACGCG GCGCACGGAT GCTGCGCACG
GCGCTGGGGC CGTCGATCGC GGCCTGGCTC GACGATCCCG CCGTGATCGA GGTGATGCTG
AACCCGGACG GACGGCTCTG GGTCGATCGG CTCGGCGAAG GCATCAGCGA CACCGGCATG
ACGCTGGCCG CCGCGGACGG CGAGCGCATC ATCCGTCTGG TCGCGCACCA TGTAGGCGTC
GAGGTTCACG CCCGATCCCC GCGTGTCTCG GCCGAGCTGC CCGAAGGAGG GGAGCGGTTC
GAGGGGTTGC TGCCCCCCGT CGTCGCCGCG CCCGCCTTCG CGATCCGCAA GCCGGCCGTC
GCCGTCTTCA CGCTCGACGA CTACGCCGCG GCCGGGATCA TGTCGCCGGC CGAGGCCGCG
GCGCTGCGCG ATGGCGTGCA GACACGCGCC AATATCCTTG TCGCGGGCGG GACCGGCAGC
GGCAAGACCA CGCTGGTCAA CGCGCTCCTC GCCGAAGTCG CCAAGACCAC CGACCGCATC
GTCCTGATCG AAGACACGCG CGAGCTTCAG TGCGCCGCGC CGAACCTCGT CGCCATGCGG
ACCAAGGATG GCGTCGTCAC GCTGTCCGAT CTCGTGCGGT CCAGCCTGCG GCTGCGCCCC
GACCGCATCC CCATCGGCGA GGTGCGCGGC GCCGAGGCGC TCGATCTCCT CAAAGCCTGG
GGCACCGGCC ACCCCGGCGG CATCGGCACC ATCCACGCCG GGACCGCGCT CGGCGCGCTG
CGCCGCATGG AGCAGCTCAT CCAGGAGGCC GTGGTCACGG TCCCCCGCGC GCTGCTGGCC
GAGACCATCG ACCTGATCGC GGTGCTGGTC CGCGACGGAC ACGGCCGCCG CCTCGCCGAG
CTGGCCCGCG TCGAGGGGAT CGACGCCGCG ACCGGCGATT ACCGCCTGAC CCCCCTCGCA
CCCCCCAACC TCGGAGACGC ACCATGA
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| Protein sequence | MSIQPIRSLG ETRGARMLRT ALGPSIAAWL DDPAVIEVML NPDGRLWVDR LGEGISDTGM
TLAAADGERI IRLVAHHVGV EVHARSPRVS AELPEGGERF EGLLPPVVAA PAFAIRKPAV
AVFTLDDYAA AGIMSPAEAA ALRDGVQTRA NILVAGGTGS GKTTLVNALL AEVAKTTDRI
VLIEDTRELQ CAAPNLVAMR TKDGVVTLSD LVRSSLRLRP DRIPIGEVRG AEALDLLKAW
GTGHPGGIGT IHAGTALGAL RRMEQLIQEA VVTVPRALLA ETIDLIAVLV RDGHGRRLAE
LARVEGIDAA TGDYRLTPLA PPNLGDAP
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