| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3650 |
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| Symbol | |
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| ID | 5196997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4010437 |
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| End bp | 4011636 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640583205 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_001264134 |
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| Protein GI | 148556552 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.794582 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.980563 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACTGT TCAAGGGCGT CCGCGTGGTC GAACTGGCAC AATATGTCAT GGTGCCCGCC
GCGAGCACCA TGCTCGCCGA CCTCGGCGCG GAAGTGATCA AGGTGGAAAC CCCGGGCGTC
GGCGATCCCT ATCGCAGCCT CGTCGTCGAC CGTCGCTCGA CAGCGGGCCC CAATTTCAGC
CTCGAACAGA ACAACCGCGG CAAGAAGAGC GTCTGCATCG ACCTCAAGAG CGCCGACGGC
CACGCGCTGC TGTGCAGCCT GATCGAGAGC GCGGACATAT TCATGACCAG CCTGCGCCCG
GCGGCGATCC GCAAGCTCGG CCTGACGGTC GAGGAGCTGC GCGCGCACAA TCCGAAGCTG
ATCTACGCCC GCGCCAACGG CCTGGGCTTC GCCGGGCCCG AGGCGGGCAA GGCCGGCTTC
GACGCCAGCT CCTTCTGGGC GCGCGGCGGC TTCGGCCATA TCCTGTCGCA GGAGGGCAGC
TACGCGCGCC AGCCGCGCGC GGTGGGCGAC CATGCAAGCG CGGTCGCGCT CGCCTTCGGC
GTGGCGGGGG CGCTGTTCAA GCGGGCGCAG ACCGGCGAGC CGTCGGTCGT CGAAACCTCG
TTGCTGTCGA TGGCGACCTG GATGCTCTCG AACGATCTGG TCGCGTCGCA GGACCCGGGC
TATCCGCCCA ACATCCTCCA GCGCGCGGTC GAGCAGAACC CGCTGGTCGG CACCTACCGC
ACCCGCGACG GCCGCTGGAT ACAGCTCGTC TTCCTCGATT CGAGCCGCTT CTGGCCCGGC
CTGTGCGCGA CGCTGGAGCT GGACGCGCTG ATCGACGATC CGCGCTTCCG CGACGCGGCC
GCGCGCATGG CCAACGGCCG CGAGCTGATC GGCATCTTCG AACAGGCGTT CGGCGCGCGC
GACTGGGCGG AGTGGCAACC CCGCTTCGAG GCGTTCGACG CGCCCTGGGA ACTGGTCCAG
AACCTGCACG ATCTCTACGC CGACCCGCAG ACGGTCGCCA ACGACATGAT CTTCGAGATC
GGCACAAAGG ACGGCTATCC GGTCAAGCTC GTCTCGGCGC CGCTGACCGT CGATGGCCGG
GCGGCGCATG CCGACCAGCC CGCGCCCCAT TGCGGCGAGC ATAGCGACGA GATCTTCGCG
GCGCTCGGCC TCGATGCCGA CCAGATCGAC CGCTATCGCG CGGCGGGCGT GATCGGCTGA
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| Protein sequence | MQLFKGVRVV ELAQYVMVPA ASTMLADLGA EVIKVETPGV GDPYRSLVVD RRSTAGPNFS
LEQNNRGKKS VCIDLKSADG HALLCSLIES ADIFMTSLRP AAIRKLGLTV EELRAHNPKL
IYARANGLGF AGPEAGKAGF DASSFWARGG FGHILSQEGS YARQPRAVGD HASAVALAFG
VAGALFKRAQ TGEPSVVETS LLSMATWMLS NDLVASQDPG YPPNILQRAV EQNPLVGTYR
TRDGRWIQLV FLDSSRFWPG LCATLELDAL IDDPRFRDAA ARMANGRELI GIFEQAFGAR
DWAEWQPRFE AFDAPWELVQ NLHDLYADPQ TVANDMIFEI GTKDGYPVKL VSAPLTVDGR
AAHADQPAPH CGEHSDEIFA ALGLDADQID RYRAAGVIG
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