Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_3636 |
Symbol | |
ID | 5196400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 3994145 |
End bp | 3995347 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640583191 |
Product | acetyl-CoA acetyltransferase |
Protein accession | YP_001264120 |
Protein GI | 148556538 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0183] Acetyl-CoA acetyltransferase |
TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.48902 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGTGAAG CCGTCATCGT TTCCACCGCG CGTACCCCGA TCGGCAAGGC CTTTCGCGGC GCGTTCAACG ACACCGAGGC GCCGGTGCTG GGCGGCCATG TCGTCCGCGA GGTCGTCGCC CGCGCCGGGA TCGACCCGGC GATGGTCGAG GACGTGATCA TGGGCTGCGC CGCGCAGCAG GGCACCCAGG GCTATAATCT CGGCCGGCTG TCGGCGGCGG TCGCGGGGCT TCCCGACAGC GTCGCGGGGA TGACGGTCGA CCGGCAATGT TCGTCGGGGC TGATGGCGAT CGCCATCGCC GCGCGGCAGA TCATGTTCGA CGGCATGGAC GTCGCGGTCG GCGCGGGCAC CGAGTCGATC AGCCTGACCC AGAACAAGCA CAAGAACGCC TATCGCGCCC GCTCCCAGGC CGCGATCGCC GCGTCGCCGC ACATGTACAT GCCGATGATC GAGACGGCCG AGATCGTCGC CGAGCGCTAT GGCGTCAGCC GCGCGGCGCA GGACGAATAT TCGCTGTCGA GCCAGCAGCG CACCGCCGCG GCGCACGCCG CCGGCCGCTT CGCCGAGGAG ATCGCGCCGC TCGCCACCGA CATGCTGGTG ACCGACAAGG CGACCGGCGA GACCAGCACC CGCCGCGTCA CCCTCGACCG CGACGAGGGC GCGCGCGGCG ACACCACGCT CGAAGGGCTG GCGTCGCTGA AGCCGGTCTT CTCGGGCGGC GAGGTGATCG CCGAGGGCAA GCACATCACC GCCGGCAATT CGAGCCAGTT GTCGGACGGC GCCGCCGCCT GCCTGCTGAT GGAGGCGGGG CTCGCGGCGA AGCTCGGCCT GAAGCCGCTC GGCGCGCTGC GCGGGCTCGC GGTCGCCGGC TGCGCGCCCG AGGAGATGGG GATCGGCCCG GTCTTCGCGG TGCCGAAGCT GCTCGAACGC AACGGGCTGA CGGTCGACGA CATCGACCTG TGGGAACTCA ACGAGGCCTT CGCCTGCCAG GTGCTCTACT GCCGCGACCG GCTCGGCATC CCGCAGGAGC GGCTCAACGT CGACGGCGGC GCGATCGCGA TGGGGCATCC GTTCGGCATG TCGGGCGCGC GCATGACGGG CCACGCCCTG CTCGAAGGGC GGCGGCGCGG CGCGAAGCGC GCGGTCGTCA CCATGTGCAT CGGCGGCGGC ATGGGCGCGG CGGGATTGTT CGAGATCTAC TGA
|
Protein sequence | MREAVIVSTA RTPIGKAFRG AFNDTEAPVL GGHVVREVVA RAGIDPAMVE DVIMGCAAQQ GTQGYNLGRL SAAVAGLPDS VAGMTVDRQC SSGLMAIAIA ARQIMFDGMD VAVGAGTESI SLTQNKHKNA YRARSQAAIA ASPHMYMPMI ETAEIVAERY GVSRAAQDEY SLSSQQRTAA AHAAGRFAEE IAPLATDMLV TDKATGETST RRVTLDRDEG ARGDTTLEGL ASLKPVFSGG EVIAEGKHIT AGNSSQLSDG AAACLLMEAG LAAKLGLKPL GALRGLAVAG CAPEEMGIGP VFAVPKLLER NGLTVDDIDL WELNEAFACQ VLYCRDRLGI PQERLNVDGG AIAMGHPFGM SGARMTGHAL LEGRRRGAKR AVVTMCIGGG MGAAGLFEIY
|
| |