Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_3629 |
Symbol | |
ID | 5197880 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 3987523 |
End bp | 3988536 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 640583184 |
Product | acyl-CoA dehydrogenase domain-containing protein |
Protein accession | YP_001264113 |
Protein GI | 148556531 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.397315 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.336622 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTTCC GCATCACCGA GGACCGCGCC GCGCTGGTCG ACAGCGTCCG CGACTATCTG GCCGGCGTGC ACGGCGTCGA ACGGCTGCGC GCGCTGGACG CCGACGGCTC GGCGCGCTCC GACGAGCTGC GCCGGGGCCT GACCGAGATG GGCCTGCGCG GCCTGCTGGT GCCCGAGGCG CAGGGCGGGC TCGGCCTGTC GCTGGTCGAC GCGGCGCTGA TCGCGATCGA GCTGGGCCGG GCGGCGGTGG CCGAGCCGCT GGTCGACGAC GCCTTCGTCG CGGTCCCGCT GCTGATCGCG GCGGGCGGGC AGGAGGCGCT GCTCGGCGCG ATCGCGACCG GCGACGCGCG GGTCGCGCTC CAGAATCCCG TCAACGGCTG GGTCGCCGAC CTCGACGGCG CCACCCACCT GATCGCCGAG CGCGACGGGC GCCTGCTGCT CGACGCCGCT CCGGCGCGGG GCGAGGCGCT CGACAGCGTC GACCCGCTGC GCCGCTTGCA GGCGCCGGTC GCCGCGAAGG GCGACGACGT CGGCGCGTCC GACGCGCTGC TCGACCATGC CGCGCTGTTC GCCGCCGCGC AGGGCGTCGG CCTCGCCGAG GCGATGCTCG CCCAGGCGAC CGATTACGCC AAGATCCGGA CCCAGTTCGG CCAGCCGATC GGCTCCTTCC AGGCGGTCAA GCACCACCTA GCCAGCGCGG CGGTGGCGAT CGAGTTCGCG CGGCCGCTGC TGCTGCGCGC CGCGCTCGCG CTCGAACAGG GGCTGGCCAG CGCGCCGGTC CATGTCAGCC ACGCCAAGCT CGCCGCCGCC GACCTCGCCT GGTCGGTCGG AGAGGCCGCG ATCCAGGTCC ATGGCGCGAT GGGCTACACC TATGAGGTCG ATCTCCACTT CTGGATGAAG CGCGCCTGGG CGCTCGCCGG CGCCTGGGGC GATCGCGCCT TCCACCTTGC CCGCATCGAC GCGGCCGTGA TCGGCGGATC GCTGCCGATC GGCCCCGCGC ACAGCTTTGC TTGA
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Protein sequence | MDFRITEDRA ALVDSVRDYL AGVHGVERLR ALDADGSARS DELRRGLTEM GLRGLLVPEA QGGLGLSLVD AALIAIELGR AAVAEPLVDD AFVAVPLLIA AGGQEALLGA IATGDARVAL QNPVNGWVAD LDGATHLIAE RDGRLLLDAA PARGEALDSV DPLRRLQAPV AAKGDDVGAS DALLDHAALF AAAQGVGLAE AMLAQATDYA KIRTQFGQPI GSFQAVKHHL ASAAVAIEFA RPLLLRAALA LEQGLASAPV HVSHAKLAAA DLAWSVGEAA IQVHGAMGYT YEVDLHFWMK RAWALAGAWG DRAFHLARID AAVIGGSLPI GPAHSFA
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