Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_3627 |
Symbol | |
ID | 5197878 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 3985723 |
End bp | 3986367 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640583182 |
Product | enoyl-CoA hydratase/isomerase |
Protein accession | YP_001264111 |
Protein GI | 148556529 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.270403 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.474294 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAGAAGG TCGGCAGCGA CCCGTCGGTC CATGTCGTGC TGATCCGCGC CGAGGGGCGC GGCTTCTGCG GCGGCGTCGA CATCAAGGAG ATGCAGGCGC ATCCCGAGCG GATCGCGCTG CTCAACCGCG GCAACTACCT GACCTTCAAG GCGATCCGCG ACTGCGAGGT GCCGGTCGTC ACCGCGGTCC ACAATTTCGT GATCGGCGGG GGCATCGGCG TGTGCGGCGC GTCCGACACG ATCTTCGCCG CCGACAACGC CTATTTCTCG CTGCCCGAGA TCGATCGCGG CGCGATGGGC GGCGCCAGCC ACCTGTCGCG CATGCTGCCG CTCCACAAGG TGCGCGCGGC CTTCTTCACC GGCGGCCGCA TCCCGGCGGC CGAGGCGCAC CGGCTGGGCG GGGTCGAGGC GGTGGTGCCC GCCGACCGGC TGGTCGAGGA GACGCGCGCC TTCTGCGCCG TCATCGCCGG CAAGAGCCGC AAGGCGCTGA CCATCGCCAA GCAGGCGCTG AACGGCATCG AGCCGCGCGA CGTCGATCGC GACTATCGCT TCGAACAGGG CTTCACCTTC GAGATGTACA TGCACGAGGA CAGCCAGGCG TCGCGCGACG CCTTCGTCCA GACCGGCGAG GCGGCGAAAT TCTGA
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Protein sequence | MQKVGSDPSV HVVLIRAEGR GFCGGVDIKE MQAHPERIAL LNRGNYLTFK AIRDCEVPVV TAVHNFVIGG GIGVCGASDT IFAADNAYFS LPEIDRGAMG GASHLSRMLP LHKVRAAFFT GGRIPAAEAH RLGGVEAVVP ADRLVEETRA FCAVIAGKSR KALTIAKQAL NGIEPRDVDR DYRFEQGFTF EMYMHEDSQA SRDAFVQTGE AAKF
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