Gene Swit_3627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3627 
Symbol 
ID5197878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3985723 
End bp3986367 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content69% 
IMG OID640583182 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001264111 
Protein GI148556529 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.270403 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.474294 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGAAGG TCGGCAGCGA CCCGTCGGTC CATGTCGTGC TGATCCGCGC CGAGGGGCGC 
GGCTTCTGCG GCGGCGTCGA CATCAAGGAG ATGCAGGCGC ATCCCGAGCG GATCGCGCTG
CTCAACCGCG GCAACTACCT GACCTTCAAG GCGATCCGCG ACTGCGAGGT GCCGGTCGTC
ACCGCGGTCC ACAATTTCGT GATCGGCGGG GGCATCGGCG TGTGCGGCGC GTCCGACACG
ATCTTCGCCG CCGACAACGC CTATTTCTCG CTGCCCGAGA TCGATCGCGG CGCGATGGGC
GGCGCCAGCC ACCTGTCGCG CATGCTGCCG CTCCACAAGG TGCGCGCGGC CTTCTTCACC
GGCGGCCGCA TCCCGGCGGC CGAGGCGCAC CGGCTGGGCG GGGTCGAGGC GGTGGTGCCC
GCCGACCGGC TGGTCGAGGA GACGCGCGCC TTCTGCGCCG TCATCGCCGG CAAGAGCCGC
AAGGCGCTGA CCATCGCCAA GCAGGCGCTG AACGGCATCG AGCCGCGCGA CGTCGATCGC
GACTATCGCT TCGAACAGGG CTTCACCTTC GAGATGTACA TGCACGAGGA CAGCCAGGCG
TCGCGCGACG CCTTCGTCCA GACCGGCGAG GCGGCGAAAT TCTGA
 
Protein sequence
MQKVGSDPSV HVVLIRAEGR GFCGGVDIKE MQAHPERIAL LNRGNYLTFK AIRDCEVPVV 
TAVHNFVIGG GIGVCGASDT IFAADNAYFS LPEIDRGAMG GASHLSRMLP LHKVRAAFFT
GGRIPAAEAH RLGGVEAVVP ADRLVEETRA FCAVIAGKSR KALTIAKQAL NGIEPRDVDR
DYRFEQGFTF EMYMHEDSQA SRDAFVQTGE AAKF