Gene Swit_3553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3553 
Symbol 
ID5198432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3914647 
End bp3915087 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content68% 
IMG OID640583108 
Producthypothetical protein 
Protein accessionYP_001264037 
Protein GI148556455 
COG category[R] General function prediction only 
COG ID[COG3788] Uncharacterized relative of glutathione S-transferase, MAPEG superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.575226 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCTGC CCATCACGCT GACGATCGCC GGGGCCGCCG CGATCCTGAA CCTATGGCTG 
GCGATCCGGA TCGTCGCCGT CCGGGTCAAG GGCAAGGTGC TGATCGGCGA CGGCGGCAAC
GCGCTGCTGT CCGCACGGAT GCGCGCCCAG CTCAACTTCA TCGAATATAC GCCGCTGGTG
CTGATCCTGA TGGGGCTGAT CGAGTTCGCC CGCGGCACCA ACCACTGGCT GTGGGGCGCC
GGCATCATCT ACATCATCGG CCGGGTGCTG CACCCGTTCG GGCTCGACCG CCAGACCGCC
AACCCGCTCC GCGCCGCCGG CATCCTGACG ACCTGGGCCG TGCTGCTCGG CCTCGCCATC
TACGCGCTGA CCATCCCCTA TACGACCAGG GACGGCGTGA TCACCACGGT GACCAGCGAC
AGCCTCGGCG CGGGGCATTG A
 
Protein sequence
MILPITLTIA GAAAILNLWL AIRIVAVRVK GKVLIGDGGN ALLSARMRAQ LNFIEYTPLV 
LILMGLIEFA RGTNHWLWGA GIIYIIGRVL HPFGLDRQTA NPLRAAGILT TWAVLLGLAI
YALTIPYTTR DGVITTVTSD SLGAGH