| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3494 |
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| Symbol | |
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| ID | 5199361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3843232 |
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| End bp | 3844395 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640583043 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_001263978 |
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| Protein GI | 148556396 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.437041 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTCCC ATCCCAGTCC CCGCCTTCGC CTCACCGGCG CCATGGCGAC CCTCTCGATA
CTCCTGTCCG GCTGCGCGAC CCTGCCGTCG AGCGGGCCGA CCGGCCGGCA GGTGCTCAAC
GGCGCCAAGA ACCCGGAGGC CGGGCTCGGC TTCGACGTCG TCGAACTCGA CGGCGCGGCG
TTCCAGAAGC TGCAGCAGCT CCAGCCCGCC GGCCGTGCGA CGGGGCAGCT CGCCGCGCTC
GCGCGGGAAG GGCGGGTCGA CCGGATCGCG CCCGGCGACG TGCTCCAGGT CAGCATCTAC
GAAGTCGGCA TGACCCTGTT CAGCAGCGGG CGGACCGCGG GACCGGCCGG CAGCGTCGAA
CCCGACACGG CGCACGCGCA GGCGATCAAT GCGGTGACGG TCGCCAGCGA CGGCACCATC
CGCCTGCCCT ATGTCGGGCG GCTGCTGGTC GCCGGCTCGA CCCCCTATGA CGTCCAGCGG
ATGATCGAGC AGGCGCTGCA GGGCAAGTCG CAGAGCCCGC AGGCGATGGT GACGGTGGTC
AACAGCCCCG GCAACAGCGT CTACATGCTC GGCGACGTGG TGCGCACCGG GCGCATCCCG
CTCACCCCCG CCCGCGAGCG GTTGCTCGAC GCGATCGCGA CCTCGGGCGG GTCGAGGGTC
AGCGGCGCCG ATACGCTGGT CCGGCTCACC CGCGGCGGCG AACATGCCGA GATGCGGCTG
GGCGACGTCC GGCCCGGCAG CAGCGACGAT CTCACCCTGT TGCCCGGCGA CCGCATCGAG
CTGGTCAACG AGCCGCGCAG CTACAGCGCG TTCGGCGCGA CGCCGAAGGT GTCGCAGGTT
CCGTTCGGGG AACCGAACCT GTCGCTGGCC GAGGCGCTGG CGCGGATCGG CGGGCCGAAT
GACGCGCAGG CCGATCCCAA GGCGGTGTTC CTGTTCCGCT ACGATGCCGC GGCGATCGCG
GCGGGCGAGC GGCCGGTCAT CTATCGCCTG AACCTGATGA AGCCCGAAAG CTACATCATC
GCGCAGAACT TCCCGATGCA CGACAAGGAC CTGATCTACA TCGCCAACTC GGCGTCGAAT
CCGGTCACCA AGTTCGTCGC GATTCTCAAC CAGCTGTTCG CGCCGCTGCT GACCGCGAAG
GTGCTGACCG ACAACAGAAA CTGA
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| Protein sequence | MISHPSPRLR LTGAMATLSI LLSGCATLPS SGPTGRQVLN GAKNPEAGLG FDVVELDGAA
FQKLQQLQPA GRATGQLAAL AREGRVDRIA PGDVLQVSIY EVGMTLFSSG RTAGPAGSVE
PDTAHAQAIN AVTVASDGTI RLPYVGRLLV AGSTPYDVQR MIEQALQGKS QSPQAMVTVV
NSPGNSVYML GDVVRTGRIP LTPARERLLD AIATSGGSRV SGADTLVRLT RGGEHAEMRL
GDVRPGSSDD LTLLPGDRIE LVNEPRSYSA FGATPKVSQV PFGEPNLSLA EALARIGGPN
DAQADPKAVF LFRYDAAAIA AGERPVIYRL NLMKPESYII AQNFPMHDKD LIYIANSASN
PVTKFVAILN QLFAPLLTAK VLTDNRN
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