| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3410 |
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| Symbol | |
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| ID | 5196757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3742364 |
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| End bp | 3743437 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640582957 |
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| Product | Rieske (2Fe-2S) domain-containing protein |
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| Protein accession | YP_001263894 |
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| Protein GI | 148556312 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0474443 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATCCCT TCACTTCCGA CCGTCCCTAT ATCCACAATG CCTGGTATAT CGCGGCCTGG
GCCGACGAGA TCGGGCGCAC GCCGCTCGAG CGCACGATCA TGGACGTGCC CATCGTCTTC
TATCGCACGC TTGCCGGCGG TGCCGTCGCC ATGCGGGGGC TCTGCCCGCA CCGTAATTAT
CCGCTTGGCC AGGCACGGCT CGATGGCGAC AATATCCGTT GCCCCTATCA TGGCTTCACC
TACGCGCCGA CCGGGCAATG CGTGGCGATC CCGGCACAGA CGAGCATTCC GCGCCATTTC
CGGCATCGCA CCTATCCCCT TGTCGAGCGT GGCGGCCTTG TCTGGATCTG GATGGGCGAT
GCCGATGCGG CGGATGTGGC ACATATGCCC GAGCTCGCTG AAATCGGCTT CGACCAACCT
GGCTGGCACG TCGTTCCCAA TGGCAGGACC GTCGTCAACG CGCGCTGGTC GCTCATCATC
GATAATGTGA TGGACCTCAG CCATGTCGGC TTTCTTCATC TGACGACGAT CGAAGCCCCC
GATGCCGGTG ATGCCAGGCC GGAGCATGGT GCGACCGACC GGATCGAGGT GATCCGCTGG
ATGTGCGACC AGAAGCCCGA CACGCCCTAT TATCGCCATG CCTTTCCCGA CAATCGCGAC
CTGCTCGATG TCGAGATGGG GTCGGTGTTT CACAGCCCCG CGCTGGTGAT CACCTATTTC
AAATTCTACA GCGCTGCCGC ACGCGGGCCG CGACGCCTGC TCGGGATGTC GAACCACCTC
CATGGCGTCA CGCCGGAGAG CCGCGGTCGC AGCCATGATT TCAGCGGCGT CGTTCGCAAT
GTCCGGCCCG ACGCCCCGGA GTTCGACCTG TGGTTGCGCG ACGCGGTCAA CCGTACCCGC
GAGGAGGATG TCGACGCGCT CGAACGGATC GAACCGCTGG TCGATCGTTT TGGCGATGCC
CGCACCGAGT TGTCGGGCAT CGGCGACGTC GGCCCCAACC GTGTTCGGCG ACGGCTCAAT
GCCTTGCTGA AAGCCGAGGA GGACGCATCG GCCCCGTCAG ACGCCACGCC CTGA
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| Protein sequence | MYPFTSDRPY IHNAWYIAAW ADEIGRTPLE RTIMDVPIVF YRTLAGGAVA MRGLCPHRNY
PLGQARLDGD NIRCPYHGFT YAPTGQCVAI PAQTSIPRHF RHRTYPLVER GGLVWIWMGD
ADAADVAHMP ELAEIGFDQP GWHVVPNGRT VVNARWSLII DNVMDLSHVG FLHLTTIEAP
DAGDARPEHG ATDRIEVIRW MCDQKPDTPY YRHAFPDNRD LLDVEMGSVF HSPALVITYF
KFYSAAARGP RRLLGMSNHL HGVTPESRGR SHDFSGVVRN VRPDAPEFDL WLRDAVNRTR
EEDVDALERI EPLVDRFGDA RTELSGIGDV GPNRVRRRLN ALLKAEEDAS APSDATP
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