Gene Swit_3377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3377 
Symbol 
ID5198846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3706010 
End bp3707101 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content69% 
IMG OID640582923 
Producthypothetical protein 
Protein accessionYP_001263861 
Protein GI148556279 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.718952 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0514733 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCGC GCTCCCGCTA TCTGCCGACG CCCGATCAGC ATCTGCTGCT CGAAGCGCTG 
ATCCGGCCCG ACGACGAGGC GGCGATCGCG GCGCGGGCGT GGCTCGACCG CATCGTCTTC
GACGATGTCG ACCTCGGCAC GCGCCGCCTG TTGCCGCTGT TCCATCTGCG GATGCGAGAG
CTGTCGATCG ACCATGCGCT CGACGGCCGG ATCCGGGGCA TCTATCGCCG CGCCTGGTAT
GTCGACCAGC GCCACGGGCG GATGCTGGCG CTGTTGCTGC CGAAGCTGGT GGCGGGCGGC
GTGCCGGTGA TCCTGCTCAA GGGGGCCGGG CTCGGCCTGA CGGTCTACCC GAACACGACG
CTTCGTCCCT ATGACGATGT CGACCTGCTC GTGCCGCACG CCCGGATAGA GGCTGCGCGC
GATATCCTGT TGGCGGACGG GTTCGCGCTC CATGGCGACT TCGCGCATTC GATCGGGCTT
CGGAAAGCCG ATCATCTCGA CATCGATCTC CACCATTCGC CCTACCGTGA TGCGGTGAAC
CGCGACCATG CCGCTCCCTT GTGGACGCGC GCGCGGCCGA TCGGCCGCGC CATGGACGGC
GTGTCGGTGC TGGGCCCCGA AGACCAGCTT CACCACACCT TGCGGCATGG GCTGAGGCGG
AACGCCGTCT CGCCGGTCCG CTGGGTCGTG GACGCGGTCC ATCAACTCCG CGCGGCCGGC
GACGCGTTCG ACTGGGATCT GCTGGTGGCC GAGACGATGC GGCTCGACAT GGTCGAGAGC
AGCCTGCGGG GGCTGGCCTA TCTGCAAAGT CTCGACGAAC GGATCGTCGA TCGGCGCGCG
CTCGCCCGCC TGACGGCCGC GCGCGGCTTG GGCTCACGGT TCCATTTCCA CCTCGAAAAC
AACCAGGGTC CGTTCGCCAA CTGGGCGGCC ACGCGGCGCA ATACGCGGGG ATTCGATCGC
GTTCGGCTGC TGCTCGACCG TTATTCGCGA CAATGGGGCA TCACGGCGCC GCTGCCCTTC
ATCCGCCACG CCGTGGTGCG CGGGTTCGAC TGGCTGATCT GGCGGCGCCT GAAGCGCCGG
CGCTCCGCCT GA
 
Protein sequence
MTPRSRYLPT PDQHLLLEAL IRPDDEAAIA ARAWLDRIVF DDVDLGTRRL LPLFHLRMRE 
LSIDHALDGR IRGIYRRAWY VDQRHGRMLA LLLPKLVAGG VPVILLKGAG LGLTVYPNTT
LRPYDDVDLL VPHARIEAAR DILLADGFAL HGDFAHSIGL RKADHLDIDL HHSPYRDAVN
RDHAAPLWTR ARPIGRAMDG VSVLGPEDQL HHTLRHGLRR NAVSPVRWVV DAVHQLRAAG
DAFDWDLLVA ETMRLDMVES SLRGLAYLQS LDERIVDRRA LARLTAARGL GSRFHFHLEN
NQGPFANWAA TRRNTRGFDR VRLLLDRYSR QWGITAPLPF IRHAVVRGFD WLIWRRLKRR
RSA