| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3376 |
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| Symbol | groEL |
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| ID | 5198845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3704215 |
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| End bp | 3705864 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640582922 |
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| Product | chaperonin GroEL |
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| Protein accession | YP_001263860 |
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| Protein GI | 148556278 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0621223 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGCGA AAGACGTCAA GTTTTCGCGC GACGCCCGTG AGCGCATCCT GCGCGGCGTC
GACATCCTCG CCGACGCGGT GAAGGTCACG CTGGGCCCGA AGGGCCGCAA CGTCGTCATC
GACAAGTCGT TCGGCGCCCC GCGCATCACC AAGGACGGCG TCACCGTCGC CAAGGAAATC
GAGCTGAAGG ACAAGTTCGA GAACATCGGC GCGCAGCTCG TCCGCGAAGT CGCCTCGAAG
ACCAACGACC TGGCCGGCGA CGGCACCACC ACCGCCACCG TGCTCGCCCA GGCGATCGTC
CGCGAGGGCC TGAAGTCGGT CGCGGCCGGC ATGAACCCGA TGGACCTGAA GCGCGGCATC
GACCTCGCCG TCACCAAGGT CGTCGAGAAC CTCAAGGCCC GCTCGAAGCC GGTCGCCGGC
TCGAACGAAG TCGCCCAGGT CGGCATCATC TCGGCCAATG GCGACAAGGA AGTCGGCGAG
AAGATCGCGG AAGCGATGGA CAAGGTCGGC AAGGAAGGCG TGATCACCGT CGAGGAGGCC
AAGGGCCTCG AGTTCGAGCT CGACGTCGTC GAGGGCATGC AGTTCGACCG CGGCTACCTC
TCGCCCTACT TCATCACCAA CCCGGAGAAG ATGCAGGTCG AGCTGACCGA CCCGTACATC
CTCATCCATG AGAAGAAGCT GTCGAACCTG CAGTCGATCC TGCCGATCCT CGAGGCGGTC
GTGCAGTCGG GCCGTCCGCT GTTGATCATC GCCGAGGACA TCGAGGGCGA GGCGCTGGCC
ACCCTGGTCG TCAACAAGCT GCGCGGCGGC CTGAAGGTCG CGGCCGTCAA GGCGCCGGGC
TTCGGCGATC GCCGCAAGGC GATGCTCGAG GACATCGCGA TCCTGACCAA CGGCGAGCTG
ATCTCCGAGG ATCTCGGCAT CAAGCTCGAG AACGTCACCA TCGGCATGCT CGGCACCGCC
AAGCGCGTCA CGATCGACAA GGACAACACC ACCATCGTCG ATGGCGCCGG TGCGGCCGAT
GCGATCAAGG GCCGCGTCGA GGCGATCCGC AAGCAGATCG AGATCACCAC GTCCGACTAT
GACCGCGAGA AGCTCCAGGA GCGCCTGGCC AAGCTCGCCG GCGGCGTCGC CGTCATCAAG
GTCGGCGGTG CGACCGAGGT CGAAGTGAAG GAGCGCAAGG ACCGCGTCGA CGACGCGCTG
CACGCGACCC GCGCGGCCGT CGAGGAAGGC ATCGTCCCCG GTGGCGGCAC CGCCCTCCTC
TATGCGACCA AGGCGCTCGA CGGCCTCAAG GGCGCGAACG ACGACCAGAC CCGCGGCATC
GACATCATCC GTCGCGCCAT CTCGGCTCCG GTCAAGCAGA TCGCCCAGAA CGCCGGCCAG
GACGGCGCGG TCGTCGCCGG CAACCTGCTG CGCGAGAATG ACGAGACCAA GGGCTTCAAC
GCCGCGACCG ACGTCTATGA GAACCTCGTC GCCGCCGGCG TGATCGACCC GACCAAGGTC
GTCCGCACCG CGCTGCAGGA CGCGGCCTCG GTCGCCGGCC TGCTCATCAC CACCGAGGCG
ACGATCGCCG AGCTGCCCGA GGACAAGGCC CCGGCCATGC CCGGCGGCGG CATGGGTGGC
ATGGGCGGCA TGGGCGGCAT GGACTTCTAA
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| Protein sequence | MAAKDVKFSR DARERILRGV DILADAVKVT LGPKGRNVVI DKSFGAPRIT KDGVTVAKEI
ELKDKFENIG AQLVREVASK TNDLAGDGTT TATVLAQAIV REGLKSVAAG MNPMDLKRGI
DLAVTKVVEN LKARSKPVAG SNEVAQVGII SANGDKEVGE KIAEAMDKVG KEGVITVEEA
KGLEFELDVV EGMQFDRGYL SPYFITNPEK MQVELTDPYI LIHEKKLSNL QSILPILEAV
VQSGRPLLII AEDIEGEALA TLVVNKLRGG LKVAAVKAPG FGDRRKAMLE DIAILTNGEL
ISEDLGIKLE NVTIGMLGTA KRVTIDKDNT TIVDGAGAAD AIKGRVEAIR KQIEITTSDY
DREKLQERLA KLAGGVAVIK VGGATEVEVK ERKDRVDDAL HATRAAVEEG IVPGGGTALL
YATKALDGLK GANDDQTRGI DIIRRAISAP VKQIAQNAGQ DGAVVAGNLL RENDETKGFN
AATDVYENLV AAGVIDPTKV VRTALQDAAS VAGLLITTEA TIAELPEDKA PAMPGGGMGG
MGGMGGMDF
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