| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3364 |
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| Symbol | |
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| ID | 5200295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3692207 |
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| End bp | 3693034 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640582910 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001263848 |
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| Protein GI | 148556266 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.319353 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGACT TCACAGGCAA GGCCGTGCTC GTCACGGGCG GCGGCGCCGG CATCGGCCGC
GCCACGGCGG AGGCGTTCAA GGCGGCCGGC GCGCGGGTCG CGACGATCGA GATCGATCCC
GCCCGGGCCG AGGAGGCGCG CGCCGCGCTG GGCGACGACG CGCTGGTCGT CGTCGGCGAC
GTGACCGACG CGGCGGCGGT CGCCGACCTC GCCGCGCAGG TCGACGCGGC GTTCGGCGGG
CTCGACGTCC TCGTCAACAA TGTCGGCGAC TTCCTGATGC TCGCCAAGCC GTTCGACCAG
CTTTCGGACG CCGAGATCGC GCGGCTCTAC GCGACCAACC TGGGCCAGGT GTTCGGCGTC
ACCAGGGCGA TGATCCCGCT GCTGCGGCGC AAGGGCGCGG GCGGCAGCAT CGTCTCGGTC
TCCTCGATCG AGGGGTTTCG CGGCATCCCC AACTGCGCGG TCTACGCTGC ATGCAAGGCG
GGGCTGACCG GCTTCACCCA GAGCCTGGCG CTCGAGCTTG GCCCCGGGGG CATCCGCGTC
AACCTGATCG CGCCCGAGAC GACCGACACG CCGCAGGTAC CGGTGTCGCT GATGATCCCG
GAGGAGCATC GCCGGCACAT CCCGAACTGG ATTCCGCTCG GCCGCTTCGG CACGCCGCAG
GACATGGCCT CGGGCATCCT GTTCCTGGCG AGCCCGCACG CGGCCTGGAT CACCGGCACC
GCGCTCCACA TCGACGGCGG CGCGCTGGCG GCGGCGGGCT GGTACCGCGA TCCGCGCGGC
ACCTGGACCA ACCTGCCGGT GCTGTCCGGC AACGGCCTCG ATTTCTGA
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| Protein sequence | MFDFTGKAVL VTGGGAGIGR ATAEAFKAAG ARVATIEIDP ARAEEARAAL GDDALVVVGD
VTDAAAVADL AAQVDAAFGG LDVLVNNVGD FLMLAKPFDQ LSDAEIARLY ATNLGQVFGV
TRAMIPLLRR KGAGGSIVSV SSIEGFRGIP NCAVYAACKA GLTGFTQSLA LELGPGGIRV
NLIAPETTDT PQVPVSLMIP EEHRRHIPNW IPLGRFGTPQ DMASGILFLA SPHAAWITGT
ALHIDGGALA AAGWYRDPRG TWTNLPVLSG NGLDF
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