| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3353 |
|---|
| Symbol | |
|---|
| ID | 5199235 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 3681325 |
|---|
| End bp | 3682269 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640582899 |
|---|
| Product | DNA methylase N-4/N-6 domain-containing protein |
|---|
| Protein accession | YP_001263837 |
|---|
| Protein GI | 148556255 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0863] DNA modification methylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.665349 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGGG CGGGGGCCGG GGCCGAGTGC GGCGCGGCGG CGATCCCGAT CCTCGATCCG
GCGGCGCTGG GGCAGGCCGA CTGGGCCGCG GCCGACCTGA TCGTCCACGG ATCGGCGCGG
GCGGCGCTCG ACGCGATGCC GGCCGGATCG GCGCATGTCG CGGTGACCAG CCCGCCCTAT
TTCGGCCAGC GCGACTATGG CGTCGCCGGC CAGATCGGGA TCGAGCCGGA CCCCGACGCC
TATGTCGCGG CGCTGGTCGC GGTGTTCCGC GCGCTGCGCC GGGTGCTGCG CGACGACGGG
ACGCTGTGGC TCAACCTCGG CGACAAATAT GCGGGCGGGG CGCTGCTCGG CATGCCGTGG
CGGGTCGCGC TGGCGCTGGT CGCGGACGGC TGGCGGCTCC GCTCCGACAT CGTCTGGCAC
AAGCCCAACG CGATGCCGCA TTCGAACAAG CGGCGGCCGA CCCACGACCA TGAATATGTC
TTCCTGCTCT CCAAGACCGA CGATTACCGC TACGACGCCG ACGCGATCCG CGAGCCGCAC
CGCACCTTCG GCCCCGACAG CCGGATGCGC GGCGGGCGCG GCCATTTCGG TCGGCGCGGC
GGCACCCCGG AACAGGGCAA GAATCGCGGC GACGCCAACC TCCATGACGG CCGCTGGGAC
CAGGCCTTCC ACCCGCTCGG CCGCAACCGG CGCACCGTCT GGTCGGTGCC GCTCGGCAAA
TATCGCGACG CGCATTTCGC GGTCTTCCCG CCCGCGCTGA TCACGCCCTG CATCCGCGCG
GGCAGCCCGG AGGGCGGCGT CGTCCTCGAT CCCTTCTTCG GCGCCGGCAC GACCGGGCTG
GTCGCGCGGG CCGAGGGCCG GCGCTTCGTC GGGATCGAGC TCAACCCCGA TTATTGCGCG
ATGGCGCGCG ACCGCATCCT CGCGGGCGGA TCGGCGCCGG CATAG
|
|---|
| Protein sequence | MSGAGAGAEC GAAAIPILDP AALGQADWAA ADLIVHGSAR AALDAMPAGS AHVAVTSPPY
FGQRDYGVAG QIGIEPDPDA YVAALVAVFR ALRRVLRDDG TLWLNLGDKY AGGALLGMPW
RVALALVADG WRLRSDIVWH KPNAMPHSNK RRPTHDHEYV FLLSKTDDYR YDADAIREPH
RTFGPDSRMR GGRGHFGRRG GTPEQGKNRG DANLHDGRWD QAFHPLGRNR RTVWSVPLGK
YRDAHFAVFP PALITPCIRA GSPEGGVVLD PFFGAGTTGL VARAEGRRFV GIELNPDYCA
MARDRILAGG SAPA
|
|---|
| |