Gene Swit_3327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3327 
Symbol 
ID5197375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3658551 
End bp3659348 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content67% 
IMG OID640582872 
Producthypothetical protein 
Protein accessionYP_001263811 
Protein GI148556229 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0869195 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00248328 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGTAGAA TGTTGGCGAT AATGGTTCCG CAAAAGCATA GGGTGATATC GTCAGTCGAC 
GCCCTGCGCA CGCCCGACGG GCTGGAGGAC TGGATGGAGA AGCTGATCTA CGCGCTGTGG
CGGGACGAGG GGCGGCCGCG CGACGCGTTC AACGCCGCTT TGCTGGGCGA GGTGGCCGAT
GCGATCGCGC CGCATGTCCG CGCGCTGCGC ATCAACGTCC GCGACGATCG GCTGCCCCAG
GGCAGCAACC CGGTCTTCGT CGTCACCGAG CCGCAGATGG AGGCGGCCGT GCAGCTCTGG
GTCGACACCG CCTATCCGCC TGCCCGCGCG CCGATCGAGG CGGCGCTCGC CACCGTCGCG
TCGCGGATCG AGGGATGGTT GGTCGCCGAA TCGACCCCGC TCCCCAACCG GCTGCATCCG
CCGGGCCAGC CGACCGAGGG CTTCTCCCAG GTGGTGTTCA TCGAGAAGCC CGCCGCCCTC
GATCACGAGA CCTGGCGCCG CAACTGGCAG GACGGCCACA CCGAGGTCGC GATCGTGACC
CAGAGCAATT TCGAATATGT CCAGAACCTG GTGGTGCGGC CGGTGACCGA TCCGGCCGGG
CCCTATGCGG CGATCGTCGA GGAATGCTTC CCGATCGCCG CGATCACTGA CAAGCAGCTC
TATTACGACG CGGCCGGCGA CCCGGCGAAG CTGGCGGCGA ACGAGGCGGC GATGCTGGAG
AGCTGCGCCC GCTTCATCGG CGCCCAGGGC TGCGACTGCA TTCCGATGCG GCAATATGAG
ATCAAGACGT TCGGCTGA
 
Protein sequence
MRRMLAIMVP QKHRVISSVD ALRTPDGLED WMEKLIYALW RDEGRPRDAF NAALLGEVAD 
AIAPHVRALR INVRDDRLPQ GSNPVFVVTE PQMEAAVQLW VDTAYPPARA PIEAALATVA
SRIEGWLVAE STPLPNRLHP PGQPTEGFSQ VVFIEKPAAL DHETWRRNWQ DGHTEVAIVT
QSNFEYVQNL VVRPVTDPAG PYAAIVEECF PIAAITDKQL YYDAAGDPAK LAANEAAMLE
SCARFIGAQG CDCIPMRQYE IKTFG