Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_3327 |
Symbol | |
ID | 5197375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 3658551 |
End bp | 3659348 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640582872 |
Product | hypothetical protein |
Protein accession | YP_001263811 |
Protein GI | 148556229 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.0869195 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00248328 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGTAGAA TGTTGGCGAT AATGGTTCCG CAAAAGCATA GGGTGATATC GTCAGTCGAC GCCCTGCGCA CGCCCGACGG GCTGGAGGAC TGGATGGAGA AGCTGATCTA CGCGCTGTGG CGGGACGAGG GGCGGCCGCG CGACGCGTTC AACGCCGCTT TGCTGGGCGA GGTGGCCGAT GCGATCGCGC CGCATGTCCG CGCGCTGCGC ATCAACGTCC GCGACGATCG GCTGCCCCAG GGCAGCAACC CGGTCTTCGT CGTCACCGAG CCGCAGATGG AGGCGGCCGT GCAGCTCTGG GTCGACACCG CCTATCCGCC TGCCCGCGCG CCGATCGAGG CGGCGCTCGC CACCGTCGCG TCGCGGATCG AGGGATGGTT GGTCGCCGAA TCGACCCCGC TCCCCAACCG GCTGCATCCG CCGGGCCAGC CGACCGAGGG CTTCTCCCAG GTGGTGTTCA TCGAGAAGCC CGCCGCCCTC GATCACGAGA CCTGGCGCCG CAACTGGCAG GACGGCCACA CCGAGGTCGC GATCGTGACC CAGAGCAATT TCGAATATGT CCAGAACCTG GTGGTGCGGC CGGTGACCGA TCCGGCCGGG CCCTATGCGG CGATCGTCGA GGAATGCTTC CCGATCGCCG CGATCACTGA CAAGCAGCTC TATTACGACG CGGCCGGCGA CCCGGCGAAG CTGGCGGCGA ACGAGGCGGC GATGCTGGAG AGCTGCGCCC GCTTCATCGG CGCCCAGGGC TGCGACTGCA TTCCGATGCG GCAATATGAG ATCAAGACGT TCGGCTGA
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Protein sequence | MRRMLAIMVP QKHRVISSVD ALRTPDGLED WMEKLIYALW RDEGRPRDAF NAALLGEVAD AIAPHVRALR INVRDDRLPQ GSNPVFVVTE PQMEAAVQLW VDTAYPPARA PIEAALATVA SRIEGWLVAE STPLPNRLHP PGQPTEGFSQ VVFIEKPAAL DHETWRRNWQ DGHTEVAIVT QSNFEYVQNL VVRPVTDPAG PYAAIVEECF PIAAITDKQL YYDAAGDPAK LAANEAAMLE SCARFIGAQG CDCIPMRQYE IKTFG
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