Gene Swit_3310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3310 
Symbol 
ID5196319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3639457 
End bp3640011 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content71% 
IMG OID640582855 
Producthypothetical protein 
Protein accessionYP_001263794 
Protein GI148556212 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0070773 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000283034 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCATCG ACGTTCCGGC CGCCCAGGCC CATGACCCTT ATGGCTATGC CACCGAGACG 
CTGGCGCCCG AGATCATGCG CGCCGGGGGC GCCTTCAGCC ACGCCGTCTA TCGCCATTCG
AAGCTGTCGC TGCGCGAGTT CGAGGGCGCC CGCGCCCGCA CCGCGGAGAT CAACGGCTGC
GTGATCTGCC AACGCTTCCG CGCCGCCCGC GACCTGGGCG GGATGTTCTC GGGCACCGGC
ACGCGCGGGA CCGTGGTCGA CAACGGCCCG CCCCCCGACG AAGCCTTCTA CGCGGCGGTG
CCCGAGTGGC GGACCTCGCC GCTGTTCAGC GACCGCGAAC GGCTGGCGAT CGAGTTCGCC
GAGCGCTTCG CCGTCGAGCC CAAGGCGCTG GCGCGCGACG AGACATTCTG GGCCAAAGCG
CGGGCCGCCT TCTCCGACGC CGAGATCGCC GACCTCGCCA ATTCGGTCGC CAGTTGGGTC
GGCCTCGGCC GGGTCGCGCA TGTGCTCGGC TTCGACGAGG TCTGCCTGCC CTTCACCGCC
GAGGCGGCGG AATAG
 
Protein sequence
MRIDVPAAQA HDPYGYATET LAPEIMRAGG AFSHAVYRHS KLSLREFEGA RARTAEINGC 
VICQRFRAAR DLGGMFSGTG TRGTVVDNGP PPDEAFYAAV PEWRTSPLFS DRERLAIEFA
ERFAVEPKAL ARDETFWAKA RAAFSDAEIA DLANSVASWV GLGRVAHVLG FDEVCLPFTA
EAAE