| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3289 |
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| Symbol | |
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| ID | 5198788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3619266 |
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| End bp | 3620018 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640582834 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001263773 |
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| Protein GI | 148556191 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.191816 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGGCGC TCGACGGCAG GACCGCGATC GTCACCGGCG CGGGGCAAGG CGTCGGGCGC
GGCATCGCCC TGGCGCTGGC GGCGGCCGGC GCGCGGGTCG CGGTGGTCGG TCGCACCCTC
GACAAGGTGG AAGGCGTCGC GGCCGAGATC GGCGCCGCCG CCCGCGCCTT CCGCTGCGAC
GTCAAGGACG CCGCGTCGAT CGACGCGCTG GTCGCGGCGG TGGCGGGCGC GTTCGGCGGC
ATCGACATCC TCGTCAACAA TGCGCAGGAG GTGCCGCTCG GCCCGCTCGC CGAGGTCAGC
GACGAAGCCT TCGCCGCCGG CTTCGAGTCG GGCCCGCTCG CCAGCTTCCG GCTGATGAAG
GCGTGCCACC CGCATCTGAA GGCGTCGGGC CAGGGCGTGA TCGTCAACCT CGCCACCTCG
GCCGCGGTCC GCTGGGACAT GAGCGGCTAT GGCGCCTATG CCGCGGTGAA GGAGGCGACC
CGCATCCTCA CCCGGGCGGC GGCGGCCGAA TGGGGCGTCG ACGGGATACG GGCGCTGACG
ATCGCGCCGC ATGCCGATTC GCCGGGGCTC AAGGCCTGGA TCGAGGGCCG GCCCGAGGAG
GCGGAGGCCT TCTTCCGCAC CATCCCGTTG CGCCGCATCG GCCGGTGCGA GGAGGATATC
GGCCGGGCGG TGGCGGCGCT GTGCGGCCCC GAATTCGGCT ATTTCACCGG CGCCACCGTC
CCGCTCGACG GCGGGCAGGC CAATTTCGAC TGA
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| Protein sequence | MAALDGRTAI VTGAGQGVGR GIALALAAAG ARVAVVGRTL DKVEGVAAEI GAAARAFRCD
VKDAASIDAL VAAVAGAFGG IDILVNNAQE VPLGPLAEVS DEAFAAGFES GPLASFRLMK
ACHPHLKASG QGVIVNLATS AAVRWDMSGY GAYAAVKEAT RILTRAAAAE WGVDGIRALT
IAPHADSPGL KAWIEGRPEE AEAFFRTIPL RRIGRCEEDI GRAVAALCGP EFGYFTGATV
PLDGGQANFD
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