Gene Swit_3268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3268 
Symbol 
ID5198722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3598339 
End bp3598938 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content69% 
IMG OID640582813 
ProductMarR family transcriptional regulator 
Protein accessionYP_001263752 
Protein GI148556170 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00976958 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAAACAT CCGCCGGCTC GGAAATCACG GCAAACAAGG AGGACGCAGA CTCGATCCGG 
TTCAGGTTGA ACCGGATCGA GTCTAAGGAC CGGGAATCGC CCGACGAGAA AGGACGCGAC
GCCACGATGA CAGCCCGCAC CACCCGCACG CTCGATCTGC AGAATTCGGT GGGCGTGCTG
CTCAACTTCC TGTCGACCCG GCTGACCGCG AGCGGATCGG CGACCTATCG CAGCCGCTTC
GGGCTCGGCA TCCTCGAATT CCGGCTGCTC GTCATGCTCG CCGCCGAGCC CGACATCCCG
CCCTCGCGCA TCTGCGAGGT GATGGGGCTC GACGGCGGCG CGGTCAGCCG GGCGCTGCGC
GGGATGGAGG CGCGCGGCCT CGTCGCCAGC CGGCCCGACC GGCGCAACCC GGCCTACAAG
CTGTGGTCGC TCACCGCCGA GGGCGCCCGC CTCCAGGACG CGGCGGTGCC GATCTCGATG
GAGCGCGACG CGATCCTGCT CGCCGGCTTC AGCGACGAGG AACGGACGAT GCTGATCGCG
ATGCTGCGGC GGATGCTGGC GCAGGTCGAC GGGCTGCGCG ACCTGATCGA TCAGCCCTGA
 
Protein sequence
METSAGSEIT ANKEDADSIR FRLNRIESKD RESPDEKGRD ATMTARTTRT LDLQNSVGVL 
LNFLSTRLTA SGSATYRSRF GLGILEFRLL VMLAAEPDIP PSRICEVMGL DGGAVSRALR
GMEARGLVAS RPDRRNPAYK LWSLTAEGAR LQDAAVPISM ERDAILLAGF SDEERTMLIA
MLRRMLAQVD GLRDLIDQP