Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_3268 |
Symbol | |
ID | 5198722 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 3598339 |
End bp | 3598938 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640582813 |
Product | MarR family transcriptional regulator |
Protein accession | YP_001263752 |
Protein GI | 148556170 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00976958 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAAACAT CCGCCGGCTC GGAAATCACG GCAAACAAGG AGGACGCAGA CTCGATCCGG TTCAGGTTGA ACCGGATCGA GTCTAAGGAC CGGGAATCGC CCGACGAGAA AGGACGCGAC GCCACGATGA CAGCCCGCAC CACCCGCACG CTCGATCTGC AGAATTCGGT GGGCGTGCTG CTCAACTTCC TGTCGACCCG GCTGACCGCG AGCGGATCGG CGACCTATCG CAGCCGCTTC GGGCTCGGCA TCCTCGAATT CCGGCTGCTC GTCATGCTCG CCGCCGAGCC CGACATCCCG CCCTCGCGCA TCTGCGAGGT GATGGGGCTC GACGGCGGCG CGGTCAGCCG GGCGCTGCGC GGGATGGAGG CGCGCGGCCT CGTCGCCAGC CGGCCCGACC GGCGCAACCC GGCCTACAAG CTGTGGTCGC TCACCGCCGA GGGCGCCCGC CTCCAGGACG CGGCGGTGCC GATCTCGATG GAGCGCGACG CGATCCTGCT CGCCGGCTTC AGCGACGAGG AACGGACGAT GCTGATCGCG ATGCTGCGGC GGATGCTGGC GCAGGTCGAC GGGCTGCGCG ACCTGATCGA TCAGCCCTGA
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Protein sequence | METSAGSEIT ANKEDADSIR FRLNRIESKD RESPDEKGRD ATMTARTTRT LDLQNSVGVL LNFLSTRLTA SGSATYRSRF GLGILEFRLL VMLAAEPDIP PSRICEVMGL DGGAVSRALR GMEARGLVAS RPDRRNPAYK LWSLTAEGAR LQDAAVPISM ERDAILLAGF SDEERTMLIA MLRRMLAQVD GLRDLIDQP
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