| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3262 |
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| Symbol | |
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| ID | 5197144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3589862 |
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| End bp | 3591607 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640582807 |
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| Product | Fis family transcriptional regulator |
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| Protein accession | YP_001263746 |
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| Protein GI | 148556164 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0731246 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00134549 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTGCGCG CCGCGAAGAA CCAGGGCCCG GACAGGCCGT CGCTGGCCGA TCGCTTCCGG
CAGGCCAGCG ATCCGTCGCT CGCCGACCTG CTCGAAACCT TCCATTTCGA CCCCGACAAG
GCGGAGATAT TCCTCAACGG GCAGCGCATG GTGCTGACCG ACAATGCCGG CCTGGCGATC
ATGCGGCGCG AGCTGATCTC GGCGCTCGGC TATGATCGGG CGCGCGGGGT GATGTCGCGG
ATCGGCTACA GCATCGGATC GGGCGACGCC GCGCTGGCGC TCGAGCTGCG CAAGGACGGC
ACCCTGTTCG AGGGCTTCAC CGTCGGTCCC CAGCTCCATT CGCTCAAAGG GTCGGTCAAG
GTCGTGCCGA AGGTCTTCGA GGCCGATCGC AAGACCGGCT ATTTCTACAG CGAATATGAA
TGGCACAATT CGGCCGAATG CCACGCCCAT CTCAAGGAGA TCGGGATCGG CCCGCACCCC
GGCGGCTGGC AGCAGGTCGG CTATGCCTCG GGCTATTCCT CCGCCTTCTT CGGCCGGCCG
ATCATCTTCC GCGAGCTGAG CTGCGTCGCG ATGGGGCACA AGCATTGCTT CCTGGTCGGC
AAGCCGGCCG AGGACTGGGA CGACCCCGAC GGCGAGCTGC GCTGGTTCCG CGCCGAGGGC
TATCCCGACC GCCCGGCCAG CCGCCGGAAG CCGGCGGCGG TCGCGGTCGG CGCGCCCGAT
CGCGACGACG GACCGCTTGG CGCGCGGCCG ATGGTCGGCG CCTCGCCCGG CTTCAACGTC
ACGCTGCACC TGGTCGACAA GGTCGCCCGG TCGGAGGCGC CGGTGCTGTT CCTCGGCGAA
AGCGGGGTCG GCAAGGAGGT GTTCGCCCGC GAACTGCACC GCCGCAGCCG CCGCGCCGAC
CGCGACCTGG TCGCGGTCAA CTGCGCCGCC ATCCCCGACA CGCTGATCGA GGCGGAATTG
TTCGGGGTCG AGAAGGGCGC CTATACCGGC GCCGACGCCT CGCGCGCCGG CCGGTTCGAG
CGCGCCGACG GCGGCTCGCT GTTCCTCGAC GAGATCGGCA CGCTGTCGCT CGCCGCCCAG
GGCAAGCTGC TGCGCGTGCT GCAGGAGGGC GAATATGAGC GGGTCGGCGG CACCCGGTCG
ATCAGGTGCG ACGTGCGGCT GATCGCGGCG ACCAACGCGA AGATGCGCGC CGACGTCGAG
GCCGGCCGCT TCCGCGCCGA CCTGTTCTAC CGCCTCAACA CCTTCCCGAT CTGGATCCCG
CCGCTGCGCG ACCGGCGCGC CGACATCCCG CTGCTCGCCA ATTTCTTCCT GCGCAAATTC
ACCGCGCGCC ACCACAAGCG CGACATCAGC TTCGACGATC GCGTCATCCG CCTGTTCCAC
GACTATCATT GGCCTGGCAA CATCCGCGAG ATGGAGAACA CCATCGAGCG CGGCGTCATC
CTCGCCTCGG ACGGGGAGAT GATCGGGGTC CATCACCTGA TGATGTCGGG CGACGCGCTC
CAGCCCGAGG ACGGCATGTC GCACGATCCG CTCGCCGACT TCATCATCGA GACCGCCAAG
CGGCCGCAGC GCCCGCCGAT CGGCGCCGCG CTGCTCGAAA GCGGCCTCTC CCACGACGAG
GTGGTCGACC ATATGGTGCG CAGCGCGCTC GACCAGTGCG GCGGCAACCA GGTCGAGGCG
GGCCGGCTGA TCGGCATGAG CCGCAACCAG ATCGCCTATC GGGTGAAGAA GCTCGGCCTG
CGCTGA
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| Protein sequence | MVRAAKNQGP DRPSLADRFR QASDPSLADL LETFHFDPDK AEIFLNGQRM VLTDNAGLAI
MRRELISALG YDRARGVMSR IGYSIGSGDA ALALELRKDG TLFEGFTVGP QLHSLKGSVK
VVPKVFEADR KTGYFYSEYE WHNSAECHAH LKEIGIGPHP GGWQQVGYAS GYSSAFFGRP
IIFRELSCVA MGHKHCFLVG KPAEDWDDPD GELRWFRAEG YPDRPASRRK PAAVAVGAPD
RDDGPLGARP MVGASPGFNV TLHLVDKVAR SEAPVLFLGE SGVGKEVFAR ELHRRSRRAD
RDLVAVNCAA IPDTLIEAEL FGVEKGAYTG ADASRAGRFE RADGGSLFLD EIGTLSLAAQ
GKLLRVLQEG EYERVGGTRS IRCDVRLIAA TNAKMRADVE AGRFRADLFY RLNTFPIWIP
PLRDRRADIP LLANFFLRKF TARHHKRDIS FDDRVIRLFH DYHWPGNIRE MENTIERGVI
LASDGEMIGV HHLMMSGDAL QPEDGMSHDP LADFIIETAK RPQRPPIGAA LLESGLSHDE
VVDHMVRSAL DQCGGNQVEA GRLIGMSRNQ IAYRVKKLGL R
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