| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3247 |
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| Symbol | |
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| ID | 5196531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3576331 |
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| End bp | 3578358 |
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| Gene Length | 2028 bp |
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| Protein Length | 675 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640582792 |
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| Product | amidase |
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| Protein accession | YP_001263731 |
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| Protein GI | 148556149 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00133527 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTCCCGGG ACATCCGACA TCCCTCGACG ATGGAGACCG GCCTCGCCGA GCTGCGGCGC
GCGCTCGACG AGCGCCGTCT CACCAGCGTC GAGCTGCTGA CCCTCTACCT CAACCGCATC
GCGCATTATG ACCGGCACGG GATCGCGCTC AACGCCGTCC CGCTGTTCAA CCCCGCGATG
TTCGAGGAGG CGCGGCGCTC CGACGAGCGG CGCGCGCGGG GCGAGACGCT GGGGCCGCTC
GACGGCATCC CCTATATCGC CAAGGACAGC TATGCGGTCG AGGGCCTCGC GGTCGCCAGC
GGATCGCCGG CATTCGAGCA TCTGATCGCC GGCCGGGACG CCTATGCGAT CGCGCGGCTG
CGCGCGGCGG GGGCGATCCT GATCGGGCTG ACCAACATGC CGCCGATGGC GGCGGGCGGC
ATGCAGCGCG GCGTTTATGG CCGCGCCGAA AGCCCCTATA ACGAGCATTT CCTGACCGCC
GCCTTCGCCT CGGGATCGTC GAACGGGTCG GGCACCGGCA CCGCCGCCGG CTTCGCCGCC
TTCGGCCTGG CGGAGGAGAC CTGGTCGTCG GGCCGCGCGC CGGCCTCGAA CAACGGTCTC
GCCGCCTATA CGCCGTCGCG CGGGGTGATC TCGATCCGGG GCAACTGGCC GCTGATCGCG
ACGATGGACG TCGTCGTCCC CTATGCGCGG TCGATGGACG ACCTGCTCGA ACTGCTCGAC
GTCCTCGTCG CCGACGATGC CGAGACGCGC GGCGACTTCT GGCGCCAGCA GGGCGCGGTC
GCGATCCCCA AGGCGTCCGA GGTGCGGCCG GCCGACTATC GGAGCCTCCG CGATCCCGAT
GCGCTGGCGG GCAAGCGGAT CGGCATCCCG CGCATGTACA TCAACAAGGA CCCCGACGGC
CCGCGCCCGA TCGCGACGCG GCCGAGCATC GTCGAGCTGT GGGGCCTCGC CGAACGCGAC
CTGAAGGCGC TCGGCGCCGA GGTGGTCGAG GTCGATTTCC CGCTGATCTC CAACTATGAG
GCCGATCCGC TGCCGGCCAA CCGGCTGGTC GAGCGCGGCC TCGTCCCCGA AGGCTTCCCC
AAGGCCGAGG GCTGGGACCT GACGATCTTC GCCTGGGACG ACTATCTCCG CGCCAATGGC
GATCCGAAGC TGAACCGGCT GGCCGACGTC GACGGCGAGA AGATCCTGCC CGCGATCCCC
GGTTTCCTGC CCGACCGCTA TGAGGGCATC CCGCCCTTCT CCGCCTTCGC CGAGGCGGCG
GCGCGCGACG GGGTGACCCC GCGCGAGGAG ATCGCCTTCC TCGAAGAGGG GCTGGTCGGG
CTCGAACGGG CGCGGCGGAT CGACCTCGAG GACTGGATGA CCGGGCTCGG CCTCGACGCG
GTGGTGTTCC CGGCGGTCGC CGACGTCGGC CCGGCCGACA GCGACATGAA CCCGCTGTCG
CAGGACGCGG CGTGGCGCAA CGGCGTCTGG GTCGCCAACG GCAACCAGGC GATCCGCCAT
CTCGGCGTGC CGACCGTCAC CGTGCCGATG GGGATGATGG CCGACATCGC CATGCCGGTC
GGCCTGACCT TCGCGGGCCG CGCCTATGAC GACAATGCGC TGCTCGCCTA TGCCTATGCG
TTCGAGGCGA GCCGGCGGCG CGTCCTGCCG CCGCGCCGGA CCCCGCCGCT GCCCGAGGAG
GGCATGCTGG CGGGCGCGGC GCGGGCGGCG ATCTCGGGCG ATGCCGGCCG GCTCGACTGG
CGGGCGACGC TGCTCCCGGT CGACGACAGC GGCCATTGCG GCATCGCGGT GGAGGGCGAG
ATCGTCGGCG GCGATGCCGG CGACGTCCGC CTGTTCGTCA ACGGCCGGCC GCTCTCGGTC
CGGCGCGACG GCCGCCGCTT CTCCGGCGAG GCGCGCCTGC CGATGGAGAC GCATAGCCGG
CTGCACAGCC GCTGGCGCGG CGCCTACGGA TCGATCGTCG TCGCGCTGCA CACGGCGCCC
GGCGGCCGCA GCACCGGCGA TTACCAGGTG GTGGGGGGGA TCGCCTGA
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| Protein sequence | MSRDIRHPST METGLAELRR ALDERRLTSV ELLTLYLNRI AHYDRHGIAL NAVPLFNPAM
FEEARRSDER RARGETLGPL DGIPYIAKDS YAVEGLAVAS GSPAFEHLIA GRDAYAIARL
RAAGAILIGL TNMPPMAAGG MQRGVYGRAE SPYNEHFLTA AFASGSSNGS GTGTAAGFAA
FGLAEETWSS GRAPASNNGL AAYTPSRGVI SIRGNWPLIA TMDVVVPYAR SMDDLLELLD
VLVADDAETR GDFWRQQGAV AIPKASEVRP ADYRSLRDPD ALAGKRIGIP RMYINKDPDG
PRPIATRPSI VELWGLAERD LKALGAEVVE VDFPLISNYE ADPLPANRLV ERGLVPEGFP
KAEGWDLTIF AWDDYLRANG DPKLNRLADV DGEKILPAIP GFLPDRYEGI PPFSAFAEAA
ARDGVTPREE IAFLEEGLVG LERARRIDLE DWMTGLGLDA VVFPAVADVG PADSDMNPLS
QDAAWRNGVW VANGNQAIRH LGVPTVTVPM GMMADIAMPV GLTFAGRAYD DNALLAYAYA
FEASRRRVLP PRRTPPLPEE GMLAGAARAA ISGDAGRLDW RATLLPVDDS GHCGIAVEGE
IVGGDAGDVR LFVNGRPLSV RRDGRRFSGE ARLPMETHSR LHSRWRGAYG SIVVALHTAP
GGRSTGDYQV VGGIA
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