| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3222 |
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| Symbol | |
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| ID | 5196201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3541118 |
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| End bp | 3541879 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 640582767 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_001263706 |
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| Protein GI | 148556124 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0355663 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACAG GGATGGGGCG CGGGCGCCGG ATCGCCGCCG AAGCCGCGCT GCTCGCCGCG
GTCGGCGCCT TCATGGGCGC GATCGGCCCC TATGACACCG ACGGCCTGCC GACCGGGCCG
CGCTTCCTCT ACTGGCTGAT CTGCATCATC GGCGGCGGCG TGATCGGCAT CGCGATCGAC
GAGCTGGCCG GCCGCCGGCT GGCGCCCTTG TGGTGGCGGC TGCTCGCCGT CTCGATCCTG
ATGACGCCGG GGGTGACCCT GCTGGTCGAC GCGACCGGCC ATTGGCTGGG CGGCCATCCG
CTGAGCCTCG CCCACTGGCT CCACAATCTC GGCCATGTCT TCGTCATATC GCTGCCGGTG
ATGACGGTGC GCGCGCTCGC CTGGCGCCGG CCGCGCCGCG AGGTCGAGAC GGTGACGCTG
GTCGCGCCGC CGCTGCCCGA GGCGGAGGCC GCCTTCCGCC GCCGCCTGTC GGCGAAGCGC
CGCACCGCGC GGCTGATCGC GATCGAGGCG CACGACCATT ATCTGCGGGT CCACACCGGC
GAGGGCGTCG AGCTGCTGAC GATGCGCTTC GCCGACGCGA TGGCCGAACT GGCGCAGGCG
CACGGCCATC GGCTGCACAG GAGTTGGTGG GCCGCCGCCG ACGCGATCGA GGCGATACGC
TGGCGGCGCG GCGGCGCCGG CGAGGCCCGG CTGGCGGGCG GCCTGACCGC GCCGGTCAGC
CGGGCGCAGG CGCCGGCGCT CAAGGCGGCG GGGTGGTTCT AG
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| Protein sequence | MATGMGRGRR IAAEAALLAA VGAFMGAIGP YDTDGLPTGP RFLYWLICII GGGVIGIAID
ELAGRRLAPL WWRLLAVSIL MTPGVTLLVD ATGHWLGGHP LSLAHWLHNL GHVFVISLPV
MTVRALAWRR PRREVETVTL VAPPLPEAEA AFRRRLSAKR RTARLIAIEA HDHYLRVHTG
EGVELLTMRF ADAMAELAQA HGHRLHRSWW AAADAIEAIR WRRGGAGEAR LAGGLTAPVS
RAQAPALKAA GWF
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