Gene Swit_3173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3173 
Symbol 
ID5199277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3484062 
End bp3485273 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content70% 
IMG OID640582720 
Productnitric oxide dioxygenase 
Protein accessionYP_001263659 
Protein GI148556077 
COG category[C] Energy production and conversion 
COG ID[COG1017] Hemoglobin-like flavoprotein
[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAAGA CACTCAGCGA GCGCACCATC GCGCTCGTCA AGGCGACCGT TCCCGCGCTC 
GAGGCCCATG GGCTGGACAT CGTGCGCGAA ATGTATGCGC GCATGTTCCA GAACCCCGAG
ATCCGCGACC TGTTCAACCA GTCGCACCAT GGCGACGGCG GGTCGCAGCC GCGCGCGCTG
ACCGGCGCGA TCCTCGCTTA TGCCGGCAAC ATCGACAATC TCGGCGCGCT CGCCCCGGCG
GTCGAGCGCA TCGCCCAGAA GCATGTCGGC CTGCAGATCC TGCCCGACCA TTATCCGCAC
GTCGCCGACG CGCTGCTCGG CGCGATCAAG GCGGTGCTCG GCGATGCCGC GACCGACGAG
ATCCTCGCCG CCTGGGGCGA GGCCTATTGG TTCCTCGCCG ACATCCTGAT CGCCCGCGAG
CATCGCGTCT ATGGCGAGCA GAAGGCGGCG GACGGCGGCT GGAACGGCTG GCGCGAATTC
CGGGTCGAGC AGGTCGTGCG CGAGAGCAGC GTGATCCGCT CCTTCGTCCT CCGGCCGGTC
GACGGCCAGG CGGTGATGGC GCACAAGGCC GGCCAGTACC TGACCTTCTG GCTGGAGATT
CCCGGCCATC CGCCGGTCAA GCGCAACTAT TCGATCTCGG GCGCGGCCAA TGGCGAGACC
TATCGCATCT CGGTCAAGCG CGAGCCGCAG GGGCTCGCCT CGGGCTGGCT GCACGACGCG
GCGCAGGCCG GCACCATCCT CAAGGTCGCG CCGCCGGCCG GCGAGTTCTT CCTCGCCGAC
CATCCCGAGC GCCCGGTGGT GCTGCTGTCG GGCGGGGTCG GGCTGACCCC GATGGTCGCG
ATGCTGGAGA CGATCGCGGC GCGCCACCCG GCGCTGCCGA CCCATTACAT CCACGGCACC
CACAATCGCG AGACCCATGC GATGCGCGAC CATGTCCGCG CGCTGGCGGC GCAGGCGAGC
GCGATCCGCG TCGTCGACTT CCACCAGACG CCGCTGCCCG GCGAGACGGC GGGCGCCGAC
TACGACCATG CCGGGATCAT CACCGACGAC TGGCTGATCG CCAACACCCC GGCGGGCGAG
GCCGATTATT ATATCTGCGG CCCGCGCCCG TTCCTGCGCG CGGCGGTGTC GGCGCTGTCG
CTCGCGGGCG TCGCGTCGGA CCGCATCCAT TACGAGTTCT TCGGCCCCGC CGACGAACTC
CTGGCCGCCT GA
 
Protein sequence
MSKTLSERTI ALVKATVPAL EAHGLDIVRE MYARMFQNPE IRDLFNQSHH GDGGSQPRAL 
TGAILAYAGN IDNLGALAPA VERIAQKHVG LQILPDHYPH VADALLGAIK AVLGDAATDE
ILAAWGEAYW FLADILIARE HRVYGEQKAA DGGWNGWREF RVEQVVRESS VIRSFVLRPV
DGQAVMAHKA GQYLTFWLEI PGHPPVKRNY SISGAANGET YRISVKREPQ GLASGWLHDA
AQAGTILKVA PPAGEFFLAD HPERPVVLLS GGVGLTPMVA MLETIAARHP ALPTHYIHGT
HNRETHAMRD HVRALAAQAS AIRVVDFHQT PLPGETAGAD YDHAGIITDD WLIANTPAGE
ADYYICGPRP FLRAAVSALS LAGVASDRIH YEFFGPADEL LAA