| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3030 |
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| Symbol | |
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| ID | 5196508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3317539 |
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| End bp | 3321048 |
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| Gene Length | 3510 bp |
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| Protein Length | 1169 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640582579 |
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| Product | indolepyruvate ferredoxin oxidoreductase |
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| Protein accession | YP_001263518 |
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| Protein GI | 148555936 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGCCT CTCCGCTATT ATCGCGACTG AAGGAGACAG CCGTGGTCAC CCCAGCCGAA
CCCCGCAACA CCGCCGTCAG TCTGGACGAC AAATGGACCG TCGATCGGGG CCGCATCGTC
ATCAACGGCA CCCAGGCGAT CGCCCGCACC CTGCTGGCGC AGCGCGAGCT GGACCGGCGG
CGCGGGCTTT CGACGGCGGG TTTCATCACC GGCTATCGCG GTTCGCCGCT CGGCAACGTC
GATATGACCC TCTGGTCGAT CGGCGATCGG CTGAGCGCGG CTGGCATCGT TTTCCAGCCC
GGCGTCAACG AGGACATCGC TGCGACCGCG GTGCATGGCA GCCAGCAGAT CGATGCAGTG
CCGGGCGCCC GCCACGATGG AGTATTCGCC GCTTGGTACG GGAAGGGTCC CGGAGTCGAT
CGTTCGGGAG ATGCCTTCAA GCATGGCAAT TATGCAGGCG CCCACGCCAA GGGCGGAGTG
CTGCTCTTCT ATGGCGACGA TCATGGCGGC AAATCCTCGA CCGTGGCGCA TCAGAGCGAA
CAGGCGATCG CCGCCAGCCT GATTCCGTCG CTCTATCCGG CGAACGTGCA GGAGATATTG
GAGTTCGGCC TGCTCGGCTT TGCGATGTCG CGCTACAGCG GATCGTGGAT CGCGATGAAA
TGCGTCAACG AGATCGCTGA GCAGACGGCT ACGATCGACA TCGACCTGCC CGCCTTCGAT
CCAGCGCTGC CCGCGATGGA CGGTGTAGGC GAGGTCAGCA TTGGCCAGGG CGTGTTCAAT
CCGCTTGGTG ACGAAAGCCT GGTGCTCGAC CATCGCCTGC CGCGCGTCCA TGCCTTTGTC
CGGGGCAACA AGATCGACCG CACGGTCTTT CGTGCCGGCA AGCCGAGGCT CGGTATCGTC
ACTGCGGGCA AATCCTACGG GGATGTGTGC GCCGCGCTGG CATTGCTCGG CCTTGACGAG
ACGAGCGCAA GCGAGGCCGG CATCTCGCTT TACAAGGTTG GCTGCATCTG GCCGCTCGAA
CCGATCGGCC TCGTCGCCTT CGCGAAAGGC CATGATGCGA TCCTCGTGGT CGAGGAGAAG
AAGAGCTTCC TCGAGCAGCA GATTGCCGAG ATCATCGTCA ACGATCCCCA GCGGCCGATG
CTGTTCGGCA AGCGCGACGA AGAGGGGCGG TCGCTCTTCT CGTCGAACCT GCCGCTGGAG
CCGGCCGGGA TCGCGCGCGT GATCGCCGAA CGGCTGGGCC GGTTGGGCCA GGCGATCGAT
GGGGCTCCGA TGCCCTCGAC AGATGGGGCC CCGGTCGACG CCGACCTGCC CAAGCGCAGC
CCCTTCTTCT GCTCAGGCTG TCCGCACAAC CGCTCGACCC GCGTACCCGA AGGCAGCACC
AGCATGACCG GTATCGGCTG CCATACCATG GCCCATTTCG TACGGCCCAA GGAGGCGCTG
CTGCCGACCC AGATGGGCGG TGAGGGCGGC AACTGGCTGG GCCTCGCGCC GTTCACCGAT
ACCAAGCACA TCTTCCAGAA TATGGGGGAC GGCACTTATT ATCATTCGGG CCTGCTCGCC
ATCCGGGCCG CGGTCGCTGC GCGGGTGAAC ATCACCTACA AGATCCTCTA TAACGACGCC
GTCGCGATGA CCGGCGGGCA ACCGGTCGAC GGCCCGATCT CGGTCGCGGA GATAGCGCGG
CAGGTGCGCG ACGAAGGGGT GAGCAAGGTC TGGCTGCTGA GCGATGATCC CATGCGTCAT
CGCGGTAATC GCGAACTGCC CGCTGAGGTG ATCATCGGCC ATCGCGACGA GCTCGATCGG
GTTCAGCGCG CGTTGCGCGA CATGCCGGGC TGCACCGTGC TGATCTACGA ACAGACCTGC
GCCGCCGAAA AGCGCCGCCG CCGCAAGCGC GGTACCTTCC CCGATCCGGC GAAGCGGCAG
TTCATCGCCA AATCGGTCTG CGAAGGCTGC GGCGACTGTT CGGTCCAGTC GACCTGCGTC
AGCCTCATGC CCGTCGACAC CGCTTTCGGG CGCAAACGGG AGATCGACCA GTCAAGCTGC
AACAAGGATT ATAGCTGCGT CGAGGGTTTC TGCCCGTCCT TCGTCACCAT CCATGGCGCC
GAGCCGCGCA AGCCCGAGAC GGTTGCGCTG GGCCAGGACC TGTTCGCCGG CCTGCCCGAT
CCCGTCCCCG CGCCGATCGC GGGGGCGAGC TATAATCTGA TGATCGCCGG GATCGGCGGC
ACCGGGGTTG TGACCGTTGG CGCGCTGCTC GGCATGGCCG CCCATATCGA GGGGCTCGCC
ATGTCGCTGT TCGACATGAC CGGCCTCAGC CAGAAAAATG GCGCGGTGTT CAGCCATGTC
CGCATCTCCC GGCGGCCCGA GGATATCCAC GCTCAGCGGC TGGGCGCGGG AGAGGCCGAT
CTCGTCATGG CGTTCGATCT CGTGGCGGCG CTGTCGCCCG AGGCGGCCAC GACCTTCTCG
ATCGGTCGGA CGCGGGCCAT CGCCAATGCC GCGGTGGCGC CGACCGTCGC TTTCCAGTTC
CAGCGGGACT TCGCCGCCGA TCCCAAGCTG CTGCTCGCCC GGCTGCGCCG CGGCATCGCC
CAGGATGGGC TCGCGACGGT CGATGCCTCG ATGCTGGCGC TTGCAATCCT CGGCGACACG
ATCGGCGCGA ACCTGTTCCT GGTCGGCATG GCGGCGCAGC GCGGGCTGCT GCCGATCCCG
ATCGCGGCGA TCGAGCGGGC GATCGAGCTG AACGGCGTTG CGATCTCGTT CAACCTGCGC
GCACTTCGGC TCGGGCGGCT GTTCGCGGCC GATCCCGATC GGGTGACCGC GCTGGTGCCG
GTACCCGAAC GCCAGGCCGA GGAGGATATG TCGCTTGACG CGCTGATCAC CCACCGTGGG
GCGCATCTGA CCGACTATCA GGATGCACGG CTGGCCGATC GCTATCGGGC GCTGGTCGAT
CGGGTGGGGC GGCGCGAGGC GGAGGTGGCG CCGGCCTCGC AGGCGCTGAC CCGCGCGGTC
GCCCGCAACC ATGCCCGGCT GCTCGCCTAC AAGGACGAAT ATGAGGTGGC GCGGTTGCTG
AGCCAGCCCG CGCTGCTCGA CGAGATACGG CGCACCTTCG CCGATGGCGG CCGGATCGCC
TTCAATCTGG CGCCGCCCCT GTTCGCGAAA GTGGGGCTCA ACGGCCGCCC GGGCAAGCGC
GAACTGGGCG CTTGGATGAT TCCGGCGATG CGCCTGCTTG CCCGTTTCCG GGCCATTCGC
GGGCGCTGGT ATGATCCGTT CGGCCAAACC GCCGAGCGGC GCATGGAGCG CGCGCTGATC
GGGGACTATG AGGCGCTGGT CGATCGCGTG CTCGACAGGT TGCACCCGGG CAATCTCGGG
GAGGCGACGA CGCTGCTGTC ACTGGCCGAC GAGATACGCG GCTTCGGCCC CGTCAAGGCG
GCGGCGGTCC ACTCTTATCG TGAGCGATTG GCCGAGGCGG AGGAACAGTT CAGCCGAGAT
TCTCGCGCCC CAACTCGGCG AGCGGGATAG
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| Protein sequence | MAASPLLSRL KETAVVTPAE PRNTAVSLDD KWTVDRGRIV INGTQAIART LLAQRELDRR
RGLSTAGFIT GYRGSPLGNV DMTLWSIGDR LSAAGIVFQP GVNEDIAATA VHGSQQIDAV
PGARHDGVFA AWYGKGPGVD RSGDAFKHGN YAGAHAKGGV LLFYGDDHGG KSSTVAHQSE
QAIAASLIPS LYPANVQEIL EFGLLGFAMS RYSGSWIAMK CVNEIAEQTA TIDIDLPAFD
PALPAMDGVG EVSIGQGVFN PLGDESLVLD HRLPRVHAFV RGNKIDRTVF RAGKPRLGIV
TAGKSYGDVC AALALLGLDE TSASEAGISL YKVGCIWPLE PIGLVAFAKG HDAILVVEEK
KSFLEQQIAE IIVNDPQRPM LFGKRDEEGR SLFSSNLPLE PAGIARVIAE RLGRLGQAID
GAPMPSTDGA PVDADLPKRS PFFCSGCPHN RSTRVPEGST SMTGIGCHTM AHFVRPKEAL
LPTQMGGEGG NWLGLAPFTD TKHIFQNMGD GTYYHSGLLA IRAAVAARVN ITYKILYNDA
VAMTGGQPVD GPISVAEIAR QVRDEGVSKV WLLSDDPMRH RGNRELPAEV IIGHRDELDR
VQRALRDMPG CTVLIYEQTC AAEKRRRRKR GTFPDPAKRQ FIAKSVCEGC GDCSVQSTCV
SLMPVDTAFG RKREIDQSSC NKDYSCVEGF CPSFVTIHGA EPRKPETVAL GQDLFAGLPD
PVPAPIAGAS YNLMIAGIGG TGVVTVGALL GMAAHIEGLA MSLFDMTGLS QKNGAVFSHV
RISRRPEDIH AQRLGAGEAD LVMAFDLVAA LSPEAATTFS IGRTRAIANA AVAPTVAFQF
QRDFAADPKL LLARLRRGIA QDGLATVDAS MLALAILGDT IGANLFLVGM AAQRGLLPIP
IAAIERAIEL NGVAISFNLR ALRLGRLFAA DPDRVTALVP VPERQAEEDM SLDALITHRG
AHLTDYQDAR LADRYRALVD RVGRREAEVA PASQALTRAV ARNHARLLAY KDEYEVARLL
SQPALLDEIR RTFADGGRIA FNLAPPLFAK VGLNGRPGKR ELGAWMIPAM RLLARFRAIR
GRWYDPFGQT AERRMERALI GDYEALVDRV LDRLHPGNLG EATTLLSLAD EIRGFGPVKA
AAVHSYRERL AEAEEQFSRD SRAPTRRAG
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