Gene Swit_2944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2944 
Symbol 
ID5198519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3228376 
End bp3228825 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content67% 
IMG OID640582494 
ProductFe-S metabolism associated SufE 
Protein accessionYP_001263434 
Protein GI148555852 
COG category[R] General function prediction only 
COG ID[COG2166] SufE protein probably involved in Fe-S center assembly 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.970825 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.017638 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCACG GGGGAAAATC CTCTAGTCCG CTCGCCATGA CCGAGCCTGC CCGTCTTGCC 
GACATCCGTG AAGAATATGA ATTCCTCGAC GGCGACGACC GCTATCGCCT GCTGATCGAC
CTGGGCCGCG CGCTCGAACC GATGCCCGAC GCGCTCAAGA CCGATGCGAC GCTGGTGCGC
GGCTGCTCGG CGTCGGTGTG GGTCTATCCG ACCGTCGCCG AAGGCGGCAC GCTCCATTTC
CTCGCCGACA GCAACGCCGC GATCACCAAG GGGATCATCG CGCTCGTCCT GGCGACCGTG
CAGGACCGGC CCGCCGCCGC GATCCGCGAC ACCGACATCG CCGCGCTGCT CGAACCCTTC
GACCTCAGGA ACCAGCTCAG CTCGAACCGC ACCCAGGGGA TACCGAACAT GATCGCGCTG
ATCCGCTCGA CCGCCGAGCG CTACGCATGA
 
Protein sequence
MTHGGKSSSP LAMTEPARLA DIREEYEFLD GDDRYRLLID LGRALEPMPD ALKTDATLVR 
GCSASVWVYP TVAEGGTLHF LADSNAAITK GIIALVLATV QDRPAAAIRD TDIAALLEPF
DLRNQLSSNR TQGIPNMIAL IRSTAERYA