Gene Swit_2834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2834 
Symbol 
ID5197759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3117188 
End bp3117640 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content64% 
IMG OID640582385 
Producthypothetical protein 
Protein accessionYP_001263325 
Protein GI148555743 
COG category[S] Function unknown 
COG ID[COG1981] Predicted membrane protein 
TIGRFAM ID[TIGR00701] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.16936 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGA TGATGGGTTT CCTGGGCAAT GCCTATCCGT GGGTGAAGGC CGCGCACGTC 
ATCTTCGTCA TCTTCTGGAT GGCGGGGCTG TTCATGTTGC CGCGCTTCTT CATTTACCAC
CATGCCGCGG CGCCGGGATC GGCCGAGGAT CGGGCATGGA TCGAGCGCGA GCGGCGGTTG
CGGTCGATCA TCATCACCCC GGCGATGATC CTGGTGTGGC TGTTCGGACT GATGCTGGCG
TTCGACCAGG CGCTGTGGAG CATCCACTGG TTCCAGGCGA AGTTCGCCAC CGTTTTCCTG
CTGTCGGGCT TCCACGGCTG GGCGGTCGGC TATGGCCGGC GGATGGCGGC TGGCTATCGC
GCCCCGTCGG ACAAGGCGCT GCGCTTCATG AACGAGATTC CCGGCATCGC CACCGCGGTG
ATCGTGATCC TGGTGATCGT CCGGCCGTTC TGA
 
Protein sequence
MTTMMGFLGN AYPWVKAAHV IFVIFWMAGL FMLPRFFIYH HAAAPGSAED RAWIERERRL 
RSIIITPAMI LVWLFGLMLA FDQALWSIHW FQAKFATVFL LSGFHGWAVG YGRRMAAGYR
APSDKALRFM NEIPGIATAV IVILVIVRPF