Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2812 |
Symbol | |
ID | 5196637 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 3100863 |
End bp | 3101780 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640582363 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001263303 |
Protein GI | 148555721 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.110516 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCGCC TTCCCGATTT CGAGGCCTGG GCGATCTTCG CCAAGGTGGC CGAGCTGGGC AGCTTCTCCG CCGCCGCCGA TGATCTGGCG CTGTCGAAGG CGACCGTGTC CAAGGCGGTG TCGCGATTGG AGCAGCGGCT GGCGGCGCCG CTGTTCCACC GCAGCTCGCG CAAATTGTCG CTGACCGAGA GCGGGCAGAT GGCGCAGGAG CGCGCGGCGC TGCTGCTCGC CGAGGGCGAG GCGATCGAGG AGGCGATCTC CGAGCGCGGC GCGGTGCCGC GCGGGCTGGT CCGGCTGGCG GCGCCGATGT CGTTCGGCAT CGCGCATCTG CGGCCGATCC TGCCGCTGTT CCACCAGGCC TATCCCGAGG TGGTGATCGA CCTGCACCTG TCCGACGAGC GGGTCGACCT GATCGAGCAG GGCTTCGACG TCGCGCTGCG CATCGGCCAG CTCGAGGATT CGGCGCTCAA GGCGCGGCGG CTGTTTCCGG TGCGGCTGCC GCTGGTCGGC GCGCCTGCCT TGTTCGACCG GCTCGGCCGG CCGGCGCATC CGCGCGACCT GGTCCGCTAT CCGGCCTTCG CCTACACCCA TGTCCGCCAT CCCGGCCGCT GGCATTTCCG CCATCCGGCC GAGGGCGAGC TGTCGGTCGA GATCAAGGGG CCGATCCGCG CCAACAATGG CGACGTGCTG ATCGACGCGC TGCTCGCCGG CACCGGCATC GCCACCGCGC CCGACTTCCT CGTCTGGCGG GCACTGGCCG ACGGCAGCCT CGAAGAGGTG CTGTCCGACT GGACCTCGGG CCCGAGCATC GCGCTCCACC TCGTCACCCC GCCGACCCCG CTGCGCCCGG CGCGGGTCAA GGTGCTGATC GACTTCCTCG CCGCCGCCTT CCTCAAGCCA CCCTGGACCA CGCGCTGA
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Protein sequence | MARLPDFEAW AIFAKVAELG SFSAAADDLA LSKATVSKAV SRLEQRLAAP LFHRSSRKLS LTESGQMAQE RAALLLAEGE AIEEAISERG AVPRGLVRLA APMSFGIAHL RPILPLFHQA YPEVVIDLHL SDERVDLIEQ GFDVALRIGQ LEDSALKARR LFPVRLPLVG APALFDRLGR PAHPRDLVRY PAFAYTHVRH PGRWHFRHPA EGELSVEIKG PIRANNGDVL IDALLAGTGI ATAPDFLVWR ALADGSLEEV LSDWTSGPSI ALHLVTPPTP LRPARVKVLI DFLAAAFLKP PWTTR
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