| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2662 |
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| Symbol | trmD |
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| ID | 5198426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2941156 |
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| End bp | 2941896 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640582216 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_001263156 |
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| Protein GI | 148555574 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCTTCG CCGCCACCAT CCTGACCCTC TACCCCGAGA TGTTCCCCGG GCCGCTCGGC
GTCTCGCTCG CCGGCCGCGC GCTGGCCGAG GGGAAGTGGA GCTGCGATCC CGTCCAGATT
CGCGACTTCG CCACCGACCG GCACCGCTCG GTCGACGACA CCCCGGCCGG CGGCGGCGCC
GGCATGGTGA TGCGCGCCGA CGTTCTCGCC CGCGCGGTCG ACCATGCGCT GGAGACGCGC
CCCGATTCGC CGCTGCTGGC GATGACGCCG CGCGGGGCGC CGCTCACCCA GGCGCGGGTG
CGCCAACTCG CCGCCGGACC CGGCGTCACG ATCCTCTGCG GCCGGTTCGA GGGAATCGAC
GAGCGGCTGT TCGAGGCGCG GCCGATCGAG CCGGTGTCGA TCGGCGACTA TATATTGTCG
GGCGGCGAGA TGGGCGCGCT GGTGCTGCTC GATGCTTGCA TCAGGCTGCT TCCTGGCGTA
ATGGGCGCGC CCGACAGCGG GGACGAGGAA AGCTTCGAAA GCGGCCTCCT CGAATATCCG
CATTATACCC GACCTGCCGA GTGGGAAGGG CGCACGATCC CCGAAGTGCT GCGATCTGGG
GATCATGCGA GGATCGAGGC TTGGCGCAAC GCCATGGCCG AGACCGATAC AAGGCTAAGG
AGGCCGGACC TTTGGGAGCG CCATGAGGGC GCTCGGGCCC AGTCTCCCTC TGGCGCGCGG
CGACAGAAGA AGGAGCGATG A
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| Protein sequence | MTFAATILTL YPEMFPGPLG VSLAGRALAE GKWSCDPVQI RDFATDRHRS VDDTPAGGGA
GMVMRADVLA RAVDHALETR PDSPLLAMTP RGAPLTQARV RQLAAGPGVT ILCGRFEGID
ERLFEARPIE PVSIGDYILS GGEMGALVLL DACIRLLPGV MGAPDSGDEE SFESGLLEYP
HYTRPAEWEG RTIPEVLRSG DHARIEAWRN AMAETDTRLR RPDLWERHEG ARAQSPSGAR
RQKKER
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