Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2629 |
Symbol | |
ID | 5196310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 2913679 |
End bp | 2914932 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640582185 |
Product | sodium:dicarboxylate symporter |
Protein accession | YP_001263125 |
Protein GI | 148555543 |
COG category | [C] Energy production and conversion |
COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCTCA AGCTGACGCC GCTGATCTTC GGCGGCATGG CGCTCGGCAT CGCGACCGGC GTCGGCGTGC ATCTCTGGGC CGGCGGCGAC GCGGCCGCCG CCGCGCGGAT CGCCGACTAT CTCCAGCTTC CGGCCGACGT CTTCCTGCGC CTGATCAAGA TGATCGTCGC GCCGCTGGTC TTCGCGACGC TGGTGACGGG CATCGCGCAT ATGGGCGACG TCGCCAGCCT CGGCCGGATG GGCGCCCGCG CGATGGGCTG GTTCGTCACC GCCGGGCTCG TCTCGCTCTC GCTCGGCCTG CTGTTCGTCA ACGCCTTCGC GCCGGGCGAG GCACTGCACC TCGTCCGCAC CGCCGATCCC GGCGGCATGG CCGAGAAGGC GCTGAGCTTC CGGCAGTTCG TGCTCCACAT CTTCCCCGAA TCGGTCGTCC AGGCGATGGC CGAGAACCAG ATCCTGCAGA TCGTCGTCTT CTCGCTGTTC GTCGGCGTCG CGCTGTCGGC GGCGGGCGAG CGGGGCAAGC CGCTGCTGGC CGTGGTCGAG GCGACCGCCG AGCTGATGCT GACGATCACC GGCTATGTCA TGCGCGCCGC GCCGCTGGCG GTGTTCGGCG CGATCGCGGC GACGGTCGCG ACCCAGGGCG CGGGGATATT GCTGACCTTC GGCGCGCTGA TCGGGGAGTT CTACGTCGCG CTCGCCGCCT TGTGCCTGGT CCTGCTCGGC GCCGGCGCGG CGTTCCTCGG CGGGGGCCTC GCGCCGCTGC TCCGCCATGT CCGCGAGCCG CTGCTGCTCG CCTTCTCGAC CGCCTCCTCC GAAGCGGCCT ATCCGCGGCT GATGGAGGCG CTCGACCGCG CCGGCGTCCC CCGCCGCGTC TACGGCTTCG TGCTGCCGCT CGGCTACAGC TTCAACCTCG ACGGGTCGAT GATGTACGCC ACCTTCGCGG CGATCTTCAT CGCCCAGGCC TATGGCGTCG ACCTGCCGAT CGCCACCCAG ATCACCATGC TGCTGGTGCT GATGGTCACC AGCAAGGGGA TTGCGGGCGT ATCGCGCGCC AGCCTCGTCG TCGTCGCGGC GACGCTCGCC CAGTTCGACC TTCCCGTCGA AGGGGTGGCG TTGCTGCTGG CGATCGATCA TTTCATGGAC ATGGGCCGCA CCACGACCAA TGTGCTCGGC AACGCGATCG CCACCGCGGT CGTCGCCAAA TGGGAAAGCG CGGACCAGCC TCGCCCCCTG ATCACCGAAA GCGGGAGACT GTGA
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Protein sequence | MRLKLTPLIF GGMALGIATG VGVHLWAGGD AAAAARIADY LQLPADVFLR LIKMIVAPLV FATLVTGIAH MGDVASLGRM GARAMGWFVT AGLVSLSLGL LFVNAFAPGE ALHLVRTADP GGMAEKALSF RQFVLHIFPE SVVQAMAENQ ILQIVVFSLF VGVALSAAGE RGKPLLAVVE ATAELMLTIT GYVMRAAPLA VFGAIAATVA TQGAGILLTF GALIGEFYVA LAALCLVLLG AGAAFLGGGL APLLRHVREP LLLAFSTASS EAAYPRLMEA LDRAGVPRRV YGFVLPLGYS FNLDGSMMYA TFAAIFIAQA YGVDLPIATQ ITMLLVLMVT SKGIAGVSRA SLVVVAATLA QFDLPVEGVA LLLAIDHFMD MGRTTTNVLG NAIATAVVAK WESADQPRPL ITESGRL
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