| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2608 |
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| Symbol | |
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| ID | 5199372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2891750 |
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| End bp | 2892913 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640582164 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001263104 |
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| Protein GI | 148555522 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0604654 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATCA TCATGACGCG CGGCGCGCTG CCGCTGACCC TTGCCCTGTT GCTGTCGGCC
TGCGGCGGCG GCGCCCCGGA AAGCGGCAAT GAGGTCGCCC CCGGCCATGG TGCCGAAGCC
GCCGGGGCCG AGCATGCCGA CGAAGGCGCG ATAGCCCTGA CCGCCGACCA GATCGCGGCG
GCGGGCATCC AGACCGGCCG CCCGATCGTC GGCGGCGCGG GCACGATCGA GCTGCCCGCC
ACGATCGAGG GCGATCCGCA GCGCACCCAG ATCGTCTCGG CCGCGATCGC TGGCCGCGTC
GTCGCGCTCC ACCGCAACCT CGGCCAGTCG ATCGGGCGCG GCCAGACGCT CGCGGTGATC
GAGAGCCGCG AAGCCGCCCA GCTCAAGGGC GAGGTCGAGG CGGCGCGGGC GCGGCTGGCG
CTCGCCGATT CGAACCTCGC GCGCGAGCGG CGGCTGTTCG CCGAGAAGGT GTCGCCCGAG
CAGGACCTGA TCGCCGCCCG GACGGCGGCG ACCGAGGCGC GCATCGCCTA TCGCCAGGCG
CAGAGCCAGG TCGCTGCGGC GGGCGGCGGC GGCGGCGGGC TCAACCGGCT CGGCATCGTC
GCGCCGCTGT CGGGGCAGGT GATCGCCCGG CCGGTGGTGC TCGGCCAGAC GGTCGCGGCC
GACGCGGAGC TCTACCGGAT CGCCGATCTC GGCAAGGTCT CGCTCGCCAT CAGCCTCAAG
CCCGAGGACG CCGGGCGCAT CCGCCCCGGC AGCCTGGTGA CGGTGACCGC GCCGGGCCGG
CAGGCCGAGG CGCGGATATC CTTCGTCTCC CCCGCGCTCG ATCCGCAGAC CCGGCAGGTG
CCGGCGATCG CCACGCTCGA CAATCGCGAT GCGATATGGC GGGTGGGCGA GCCGGTGACG
GCGTCGATCC AGCTCTCCGA CGGCAGGGGC GGCACCGCGA TCCGGGTGCC CGCGACGGCG
GTCCAGACCG TCGAGGGCAA GACCGTCCTG TTCGTGCGGA CGCCCAAGGG CTTCCAGGCG
ACCCCGGTGC GGATCGGCGA CGCCAGCGGC GATACCGTCG TGTTGCTCTC GGGCCTGACC
GGCCGCGAGG TGATCGCCAC CACCAACAGC TTCACGCTCA AGGCCGAACT CGGCAAGGGC
GAAGCCAGCC ACGACGAGCA TTGA
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| Protein sequence | MKIIMTRGAL PLTLALLLSA CGGGAPESGN EVAPGHGAEA AGAEHADEGA IALTADQIAA
AGIQTGRPIV GGAGTIELPA TIEGDPQRTQ IVSAAIAGRV VALHRNLGQS IGRGQTLAVI
ESREAAQLKG EVEAARARLA LADSNLARER RLFAEKVSPE QDLIAARTAA TEARIAYRQA
QSQVAAAGGG GGGLNRLGIV APLSGQVIAR PVVLGQTVAA DAELYRIADL GKVSLAISLK
PEDAGRIRPG SLVTVTAPGR QAEARISFVS PALDPQTRQV PAIATLDNRD AIWRVGEPVT
ASIQLSDGRG GTAIRVPATA VQTVEGKTVL FVRTPKGFQA TPVRIGDASG DTVVLLSGLT
GREVIATTNS FTLKAELGKG EASHDEH
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