Gene Swit_2595 details

Gene Information

• Locus tag: Swit_2595
• Symbol: nadE
• ID: 5200837
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sphingomonas wittichii RW1
• Kingdom: Bacteria
• Replicon accession: NC_009511
• Strand: -
• Start bp: 2876874
• End bp: 2878937
• Gene Length: 2064 bp
• Protein Length: 687 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 640582151
• Product: NAD synthetase
• Protein accession: YP_001263091
• Protein GI: 148555509
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0171] NAD synthase
• TIGRFAM ID: [TIGR00552] NAD+ synthetase

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 0.649167
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 16
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCGGCTG CCGCCTCCTT CCGTTCGATC CACCGCCACG GCTTCGTGCG CGTCGGCGCG 
GGGACGCCGG TGGCGAGCGT CGGCGACGTC GCGGCGAACG CGGCGGGCAT CCTCGATCTG 
GCGCGGCGCG CCGATGCCGA GGGGGTCGAC CTGCTCGTCC TGCCCGAGTT GGCGCTGTCC 
TCCTACGCGA TCGACGACCT GCACCTGCAG GACGCCCAAC TCGACCGGGT CGAGGCCGAG 
CTGGCGGGGA TCGTCGCGGC GAGCGCGGAC CTCGCCCCGG TGCTGCTGGT CGGCGCGCCG 
ATCCGCCGCA ACGGACGGCT CTACAACACG GCGGTGGTGG TCTCGCGCGG CCGCATCCTC 
GGCGTCGTGC CGAAGAGCTT CCTCCCCAAT TACCGCGAAT ATTACGAGAA GCGCTGGTTC 
GCGCCCGGCG CCGGCCTCAC GGGGCTCGCG CTGCGGCTGT GCGGGCAGGA GGTGCCGTTC 
GGGCCGGACC TGGTCTTCGC CGCCGCCGAC CTCGCCGACT TCAGCTTCCA TGTCGAGATC 
TGCGAGGATT ATTGGGCGCC GCTGCCGCCG TCGACGGCGG GGGCGATGGC GGGCGCGCTG 
ATCCTGTGCA ACCTCTCCGC CTCCAATATC ATCGTCGGCA AGGCGCGCGA GCGGGCGCTG 
CTCGCCGCGT CGCAGTCGAC CCGCGCGATC GCCGCCTATT GCTATTCGGC GAGCGGACCG 
GGCGAGAGCA CCACCGACCT CGCCTGGGAC GGGCAGGCGA TGATCCACGA GCTCGGGCAG 
ATGCTCGCCG AATCGACCCG CTTCGGCATG GACCCGGAGC TGATCGCCGC CGACGTCGAC 
GTCGCGCGGC TGCGGCTCGA ACGGATGCGG ATGGGCACGT TCAACGACTG CGCGGCGGCG 
AACGGCCATC CCGAGGCGCG CTTCCGCACG ATCGGCTTCG AGCATCGCCC GCACCGCGCC 
GACGTCGGGC TGCGGCGGCC GGTGGCGCGC TTCCCCTTCG TCCCCGCCGA CCCCCGCGAG 
CTCGACGCCG ACTGCTACGA GGCGTTCAAC ATCCAGGTCG ACGGGCTGAT CAAGCGCTTC 
CGCTCGACGC GCGGCAAGGC GATGGTGATC GGCGTGTCCG GCGGACTCGA TTCGACCCAT 
GCGCTGATCG TCGCGGCCAA GAGCTGCGAC CGGCTCGGCC TGCCGCGCAG CGCGATCCGC 
GGCTACACCA TGCCCGGCTT CGCGACCGGC GACGCGACCA AGGCCAATGC CTGGGCGCTG 
ATGCGCGCGC TGGGCATCAC CGCCGAAGAG ATCGACATCC GTCCGGCCGC GCGGCAGATG 
CTCGGCGACA TGGGCCATCC CTTCGCGCAA GGGGAGCCGG TCTACGACGT CACCTTCGAG 
AATGTGCAGG CCGGCCTGCG CACCGACTAT CTGTTCCGCC TCGCCAACCA GCATGACGGC 
TTCGTCGTCG GCACCGGCGA CCTCAGCGAG CTGGCGCTGG GCTGGTGCAC CTATGGCGTC 
GGCGACCAGA TGAGCCATTA TGCGGTCAAT GCCGGCGTGC CCAAGACGCT GATCCAATAT 
CTGATCCGCT GGTGCGTGCG GACCGGCCAG TTCGATCCCG CGACCGACGA CATATTGACC 
GCGATCCTCG GCACCGAGAT CTCGCCCGAG CTGGTCCCCG CCGACGCCTC GGGCGCGATC 
CAGAGCACCG AATCGAAGGT CGGGCCCTAT GAGCTCAACG ACTTCTTCCT CCACCATGTC 
GCGCGGCTGG GGCTGAAGCC ATCGAAGGTC GCCTTCCTCG CCTGGCACGC CTGGAAGGAT 
GCCGATGCCG GGCTGTGGCC GGCGGGCTTC CCCGACGATC TGCGCAACGC CTACGACCTG 
GCGACGATCC GGTCCTGGCT CGAGAAATTC CTGTTCCGCT TCTTCACGAT CAGCCAGTTC 
AAGCGATCGG CCATCCCCAA CGGGCCGAAG CTGTCGGCGG CCGCCGCGCT GTCGCCGCGC 
GGCGACTGGC GGGCGCCGTC GGACGGGACG GCGACGGTCT GGCTCGACGA GCTGGCCGCC 
GCGCTCGACG GCGTCGAGGA CTGA 

 

Protein sequence

MSAAASFRSI HRHGFVRVGA GTPVASVGDV AANAAGILDL ARRADAEGVD LLVLPELALS 
SYAIDDLHLQ DAQLDRVEAE LAGIVAASAD LAPVLLVGAP IRRNGRLYNT AVVVSRGRIL 
GVVPKSFLPN YREYYEKRWF APGAGLTGLA LRLCGQEVPF GPDLVFAAAD LADFSFHVEI 
CEDYWAPLPP STAGAMAGAL ILCNLSASNI IVGKARERAL LAASQSTRAI AAYCYSASGP 
GESTTDLAWD GQAMIHELGQ MLAESTRFGM DPELIAADVD VARLRLERMR MGTFNDCAAA 
NGHPEARFRT IGFEHRPHRA DVGLRRPVAR FPFVPADPRE LDADCYEAFN IQVDGLIKRF 
RSTRGKAMVI GVSGGLDSTH ALIVAAKSCD RLGLPRSAIR GYTMPGFATG DATKANAWAL 
MRALGITAEE IDIRPAARQM LGDMGHPFAQ GEPVYDVTFE NVQAGLRTDY LFRLANQHDG 
FVVGTGDLSE LALGWCTYGV GDQMSHYAVN AGVPKTLIQY LIRWCVRTGQ FDPATDDILT 
AILGTEISPE LVPADASGAI QSTESKVGPY ELNDFFLHHV ARLGLKPSKV AFLAWHAWKD 
ADAGLWPAGF PDDLRNAYDL ATIRSWLEKF LFRFFTISQF KRSAIPNGPK LSAAAALSPR 
GDWRAPSDGT ATVWLDELAA ALDGVED